| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0670 |
|---|
| Symbol | |
|---|
| ID | 6364007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 762572 |
|---|
| End bp | 765181 |
|---|
| Gene Length | 2610 bp |
|---|
| Protein Length | 869 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642679828 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_001954614 |
|---|
| Protein GI | 189439533 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.965003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATC TCAAGCAGCG TCTCTTGTCA TGGATGCATG GCCATGTTTT CGCAGGCGAT
CTCATCATCA CGCTTGTTAT AGGTGTTCTG CTGTTCGGCG TGACCGGCGG CATCACCTAT
AATCCGGGAT TGCTGTTTGA CCTTAAGCCT TCCACGCAGA TGACATGGGA AGCGGCAATG
CTTATTCCGC TGCTAATCCG TCGATGGTGG CCACAGACCG GAGCGTTGCT CTGCGTGGCA
TTGACCTTGG CGCATCTCAT ATTCGGCCCT TGCCTGTTGG GTGCCGATAT TCTGGCATTG
TTCATGCTGT ATTCAGTGAT CGTCTACGGC AATCCCAAAA ACACGAAAGC CTTCATTATT
CTGGCGTTGA CCATCGGTCT TCTGGCTTCG GCGCTGGCGG CATGGACCAT GACCAATGGA
CCACTGCTCA CCGGAGGCAA AGTGCATACA TGGAGCAGCT GGAATGACTC AAATCCAAAT
GGCGTTATGG TCACGGAAGA CACTCTCGGT TCCATCTACA CAGGAACATC CATATCGGAA
GTCGCCGACA TGGTGGCGCA TTCCATGCTG GTGCTGACGC CGATTTTCGA AGTATGTATC
ATTTCCACCG TCATTGTAGC GTTCTGGCAG CGTGCCCGTC TGGCAACCAT TCGCATGATG
CGGGAACGCA ATGAGGCAAT CGCCGCGCGA GACCAGGATG AACGCGATAT CGCCGCGTTG
GCGGAACGCG CACGCATCGC ACGTGACATG CACGATGTGG TGGCGCACAC CCTGTCAATC
ATCATCGTGC AGTCTGATGG TGGTCGCTAT GCAGGCACGC ATGATCCCGC GGTGGCCAGA
AACACCATGG AGACGATTCG ACACGAATCG GAACGCGCAC TGCATGACAT GCAACGTCTT
CTGGGAGTAT TCGGGGGTTC ACCGCACGCC GATTATAACG ATATCGGCAA TCTTGTGGAA
CAAGCGCAAA ACGTCTCCCC CGACATTCGA ATCCGACGGA ATATCACCGG CACCGCCAGC
CCGGAACAAC TCGGCGAACA AGCCTCGATA GCTTCCTACC ATGTAGTGCA GGAGGCACTG
ACGAATATCC GCAAGTATGC GGGGCCGCAC GTCGATGTGC ACATTAAAGA GTCATGGAAC
AACGGTTTGC TCACTTTGAC CATCACCGAC AATGGTCATG GCGCGGCGGC CAATATCGAC
GGGCATACGC CAGGTTACGG CCTGCTGGGC ATGAAAGAAC GCATCGAATC GGCCGGAGGC
TCGTTGCAGG CTGGCCCTCA ACTCGGCGGA GGCTTCGAAG TCATGGCCAC CCTGCCTTAC
GGCGGTAAAG AACAGGTGAC AGAAGAAACC GGCGAACAGT ATGCCTCGGA ACAGTCCGAA
TCGTGCAACA CAACTGCCAT ATCCAGCAAA GCGAAACTAT CCGACGAAGC AATCGCACCT
CACACAGTCG TCAACATATC GGCGCGAATC CCAGATCAGC CATCGGAGCA AACGAAGGAA
ACCAACCAAC CGACCGGTCG CGATCATCGT TCGAATGCCC TGCAACATTT GCGCATCACC
GCACCCAATC TGCATGATTT GCTCAAATCA TTGAAACTGA AATCCGTAGA ACTTGCAAAT
ACATCCAATT CGCGAGGGCT GAATTGGGTG GAACGTGTTT CCGCGTGGAC GCAGCGCCAT
TATGCGCTCA TGGATTCCGT TGGTGCCGTG GCATTGGTCA TGCTGCTGAA TCGCATGTCG
GTTACGTTCT TTTTTGATAG TTCACCTCAT GCGCAGCTCT CAAATGCGAT CGCCGCATGC
TGCTTGCTGG CGCTGGCTCT TCGACGCAGG TTCCCCGAGA CTTGCGCGCT TATTGTGTTC
GTATTGTCAG TTGTGCAATT GGTGTTTTTG GGATCGATTG AGGTTGGACA TATCGTAGCG
TCGCTGTGTG CGCTGTATTC AGCCGTATTG TATGGGCGTG AACACGCATG GCGTTGGACC
GGTCTTGCCG CCGCTACCTG TTCGGTGCTG ATGGGCTTGA AAATCGCGGC TGATCAACAC
GGATACACTA CCTTGTTCGG CGCCATCGCC GCTTTTGCAG GCTTGACGAA ACCGGTTTCA
GTCACGTCAA GTACTACGGC GGCGTTCTTT ACCGGCGTTA TGTATACGGT TGCAGTGCTG
ATGCTGTGCG CCGGCATTAT GGCGTGGGCA CGTTGGGCTC GTTCCAGTGA TTCAAACGCA
CTGGTGTTGC AGGCGCGAGA GGAAGCGCTG GTGGCCGAGC AGGAGAAGCA GCGTATTCTC
GCGGCGAATA TGGAACGTGA CCGTATCAGT GCCAGCATTC AGGCTGAAGT CACCGCCACG
TTGAACAGCG TGATTAGTCA AGCCGTCGAT GGTATCCGCA TGCTGGATAG CGCCGAAGCA
CAAGGCAAAG AGCCTACCGC CGACGAGATT TCCGCAGCGT TCAAAGCCAT TGGCGAGCAG
GGGCGCGCCG CGCTTAAGCG TATGCGCGAA TTGCTTGGCG TGCTTCGTGA GACTGGTTTC
AGCGATGACG CTCATGCCGG TAGTGCGAGC GAACTGCAGT TGAGGCCCGC AGCACCATTG
GAGGAGCAGC TGCAGCGCGT GCCTCGATAG
|
|---|
| Protein sequence | MSNLKQRLLS WMHGHVFAGD LIITLVIGVL LFGVTGGITY NPGLLFDLKP STQMTWEAAM
LIPLLIRRWW PQTGALLCVA LTLAHLIFGP CLLGADILAL FMLYSVIVYG NPKNTKAFII
LALTIGLLAS ALAAWTMTNG PLLTGGKVHT WSSWNDSNPN GVMVTEDTLG SIYTGTSISE
VADMVAHSML VLTPIFEVCI ISTVIVAFWQ RARLATIRMM RERNEAIAAR DQDERDIAAL
AERARIARDM HDVVAHTLSI IIVQSDGGRY AGTHDPAVAR NTMETIRHES ERALHDMQRL
LGVFGGSPHA DYNDIGNLVE QAQNVSPDIR IRRNITGTAS PEQLGEQASI ASYHVVQEAL
TNIRKYAGPH VDVHIKESWN NGLLTLTITD NGHGAAANID GHTPGYGLLG MKERIESAGG
SLQAGPQLGG GFEVMATLPY GGKEQVTEET GEQYASEQSE SCNTTAISSK AKLSDEAIAP
HTVVNISARI PDQPSEQTKE TNQPTGRDHR SNALQHLRIT APNLHDLLKS LKLKSVELAN
TSNSRGLNWV ERVSAWTQRH YALMDSVGAV ALVMLLNRMS VTFFFDSSPH AQLSNAIAAC
CLLALALRRR FPETCALIVF VLSVVQLVFL GSIEVGHIVA SLCALYSAVL YGREHAWRWT
GLAAATCSVL MGLKIAADQH GYTTLFGAIA AFAGLTKPVS VTSSTTAAFF TGVMYTVAVL
MLCAGIMAWA RWARSSDSNA LVLQAREEAL VAEQEKQRIL AANMERDRIS ASIQAEVTAT
LNSVISQAVD GIRMLDSAEA QGKEPTADEI SAAFKAIGEQ GRAALKRMRE LLGVLRETGF
SDDAHAGSAS ELQLRPAAPL EEQLQRVPR
|
|---|
| |