Gene BLD_0654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0654 
Symbol 
ID6364224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp744993 
End bp746156 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content53% 
IMG OID642679812 
Productputative virion core protein 
Protein accessionYP_001954598 
Protein GI189439517 
COG category[S] Function unknown 
COG ID[COG4260] Putative virion core protein (lumpy skin disease virus) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000256286 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTTA TTAAGGCGTT CGCCGGCGCG CTCGGCGGTA CATTCGCGGA CCTGTGGCGT 
GATATCATCA CCGCTGGTCC GTTCACGGAA CACACCGTCG TTGTGCCGGG CATTCCCCGC
GGAAGCAACA ACGATCGCGG TTCGAATGAA TACGGTTCCG AGGGAATAAT CACCAATGGT
TCGCGTATCT ATGTGCCAGA GAATACTGCG GCGTTCATTT TCTCTGAAAC AGGTATCGAA
AACGTCATCA CCGAGTCGGG CGGTTATGAA TATCGCAACG GGGAGCAGAG CGTGCTCGCC
GGAGACGGCA TCGGATCGTT CTTCAATCAG GTTGCCGATC GATTCACCTT CGGAGGTCAG
CCTGGCCGCA CCAAATATGT GGCCTTCGTC AACCTGCGTG AGATTCGTGG CATCAAATTC
GGCACTTCTG CGCCGCTGGT GTATAACGAC CGGTTCTATG GCGTCGATTT GGAAATTCGC
GCACGCGGAT CCATGTCGCT AAAGGTCACT GATCCAGTTC GATTCGTTCG TAACTTTGTG
CCTGCCACTA CCGTGTCGTA TTCATTCGAT GATGAAGGGC CACGTAGGCA GATTCTGTCT
GAATTCGTAC AGTCGTTTAT TGTGGCCATC AATTCGTTGT CCAATGAATA TCGTATTTCG
CAATTGCCCG GCAAGGCGAA TGACATCGCA GCATGCGTGC GTGGCGATCG GGCCAATGCG
GGTACGTGGA ATGATCGTTT TGGCTTTGAA GTGTCCAGTG TGGGCATCGA AAGTATCGAG
TTCACCGAGC AATCACGTCA ACTCGTGCAG CAGTTCGCCT CGAATAAGAT GAATGTTGCC
GCATACGAGG GCGTTTCCCA ACAAGCTGGC AATATGGCTG CCCAGCAGCG CATTGCGCAA
GGTATTCAAG ACAACGGCTT TGGCGATGGT GGCATGTTGC TTGGTATGAA TATGGCGCAA
TCCATCAATC CTATGACGGC CGCCCCGGTT CAAGCGCCGG CACTTGCGCC GGCACCGGAA
GCCGCTGCTC CCGCCTCTCA CACGGCATCC ATGTCTGTGG AAGAACAAGT CGAGGCGATG
AAGAAATTGA AGGAATTGGT TGATATCGGC ATTCTCTCCC AAGAAGAATT TGATGCAAAA
AAGCACGAAA TTCTTGGCCT ATAA
 
Protein sequence
MAVIKAFAGA LGGTFADLWR DIITAGPFTE HTVVVPGIPR GSNNDRGSNE YGSEGIITNG 
SRIYVPENTA AFIFSETGIE NVITESGGYE YRNGEQSVLA GDGIGSFFNQ VADRFTFGGQ
PGRTKYVAFV NLREIRGIKF GTSAPLVYND RFYGVDLEIR ARGSMSLKVT DPVRFVRNFV
PATTVSYSFD DEGPRRQILS EFVQSFIVAI NSLSNEYRIS QLPGKANDIA ACVRGDRANA
GTWNDRFGFE VSSVGIESIE FTEQSRQLVQ QFASNKMNVA AYEGVSQQAG NMAAQQRIAQ
GIQDNGFGDG GMLLGMNMAQ SINPMTAAPV QAPALAPAPE AAAPASHTAS MSVEEQVEAM
KKLKELVDIG ILSQEEFDAK KHEILGL