| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0611 |
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| Symbol | aroB |
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| ID | 6364337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 699549 |
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| End bp | 701171 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642679769 |
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| Product | bifunctional shikimate kinase/3-dehydroquinate synthase |
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| Protein accession | YP_001954555 |
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| Protein GI | 189439474 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase
[COG0703] Shikimate kinase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.488786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAC GCCCCCGCGC CGTCATCATC GGCATGATGG GAGCCGGCAA AACACGTGTC
GGTAAGGAAG TGGCGCATAT GTTGCGTCTG CCGTTCGCCG ATGCCGATGT GGAGATCGAA
CGTGAAGTGG GCATGAAGAT TCCCTCCTAC TTCGAGGAAT ACGGTGAGCC GGCATTCCGC
GAGGTCGAGG CCGATCTCAT CGCCGATATG CTTGAGGATT TCGACGGTAT CTTTTCGCTG
GGCGGTGGCG CTCCCATGAC GCCATCCACC CAGCATGCCC TCGCCTCCTA CATCGACCAT
GGCGGTCGTG TGGTCTACCT TGATGCCGAT CCGGCGGAAG CCATGGAACG CGCGAACCGT
GGGGGAGGCC GGCCCATGCT CAATGGCAAC GCCAACTCCC GTTGGAAAAA ACTGTTCAAG
CAGCGTGACC CAGTATTCCG CGAGGTCGCC AACGTTCATG TCCATACCCG GGGGCTTACG
CCTCAGGGCG CAGCGAAGAA AGTGATTGAT ATGGTATCTG AGCGAGCAGT GCATGTTACC
GGAGCGGCAA TTGAGCCGTA TGATGTGGTC ATTGGCGAAG GTGCCATGAA CCATCTGGTC
GACGTGCTGG GACCCAAACC CGCCAAAATC GCGCTTATCC ACACTCAGCC GGTGCAGCGA
CACTCCGATC GTGCCCGCGC CCTGTTGCGT CAGGGCGGCT ATGAGGTTTC CGACATCGTG
ATTCCGGATG CCGAACCCGG CAAGACCATT ACCGTGGCCA ACGGCATTTG GGAACGCCTT
GGCAACGAAG GTTTCACCCG ATCCGATGCC GTGGTGGGGC TTGGCGGCGG TGCCGCAACC
GATTTGGCCG GTTTCGTGGC TGCCACGTGG ATGCGCGGCG TGCGCTATGT AAACTGCCCG
ACCTCGCTGC TGGCCATGGT CGATGCCTCC ACCGGTGGCA AAACCGGCAT CAACACCCCG
CAGGGCAAGA ACCTCGTCGG CTCGTTCTAC ACGCCTGCCG GTGTGCTGGC CGACACCAAG
ACGCTGGCTA CGCTGCCCAA TGACATCTTC ATCGAGGGTC TCGGCGAAGT CGCCAAATCC
GGTTTCATCC GCGACCCCGA AATCCTGCAT ATCCTCGAAG ACCACGCAGC TGAACTGCGC
GCTTTCGACG GCTCTACATT CCTCGGCTCG CCGCTCGAAG ACGTGGTTGC CGAGCTCATT
GAGCGCACGG TAAAGGTCAA GGCCTACCAC GTCTCCTCCG ATTTGAAGGA GAAGGGTCTG
CGTGAATTCC TCAACTACGG GCACACGATG GGCCATGCCA TCGAAAAGCT CGAGCATTTC
CGCTGGAGGC ATGGCAATGC GGTGGCCGTC GGTATGGTGT ATGCCGCCGA GCTGGCCCAT
CTGATCGGTT ACATCGATCA GGATCTGGTT GACTATCACC GCTCGTTGCT TGCTTCGATG
GGTCTGCCGA CGTCGTGGAA TGGCGGCTCG TTCGACGACG TGCTCGCATT GATGCATCGC
GACAAGAAGG CCCGCGGCAA TGAGCTGCGC TTCGTGGTCC TCGACGAGAT TGGTCACGTC
GTACACCTCG ACAACCCGCC CGCCGAAGCC GTGGAAGAAG CATTCCGTCG TATCCAGCAG
TAA
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| Protein sequence | MTARPRAVII GMMGAGKTRV GKEVAHMLRL PFADADVEIE REVGMKIPSY FEEYGEPAFR
EVEADLIADM LEDFDGIFSL GGGAPMTPST QHALASYIDH GGRVVYLDAD PAEAMERANR
GGGRPMLNGN ANSRWKKLFK QRDPVFREVA NVHVHTRGLT PQGAAKKVID MVSERAVHVT
GAAIEPYDVV IGEGAMNHLV DVLGPKPAKI ALIHTQPVQR HSDRARALLR QGGYEVSDIV
IPDAEPGKTI TVANGIWERL GNEGFTRSDA VVGLGGGAAT DLAGFVAATW MRGVRYVNCP
TSLLAMVDAS TGGKTGINTP QGKNLVGSFY TPAGVLADTK TLATLPNDIF IEGLGEVAKS
GFIRDPEILH ILEDHAAELR AFDGSTFLGS PLEDVVAELI ERTVKVKAYH VSSDLKEKGL
REFLNYGHTM GHAIEKLEHF RWRHGNAVAV GMVYAAELAH LIGYIDQDLV DYHRSLLASM
GLPTSWNGGS FDDVLALMHR DKKARGNELR FVVLDEIGHV VHLDNPPAEA VEEAFRRIQQ
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