Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0609 |
Symbol | pepV |
ID | 6364335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 697289 |
End bp | 698659 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642679767 |
Product | dipeptidase |
Protein accession | YP_001954553 |
Protein GI | 189439472 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.120564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGCCA AGGCAGGACG AGACGGGCTG CCTACGCGCG ACTACACCGG CCACGTCATG GAAGTCGTTT ATCCACAGGA GAACGTGGAG ACCGACCGTG ACATCGCCTT CGTCGACCAC CTCGACGTAG TCCCCGCCGA CGACGGTTGG ACGCACGATG CCTTCGATCC GCAGGTTATT GGCGATATTG TTATCGGTCG CGGCTCATTG GACAATAAAG GCGTCGCGCT GACCAGCTAT TTCCTACTCC GTTTCTTCAA GGAACACGAC CACCGTTTCC GCCACCGCGT ACGTATACTG TTCGGCGGCT CCGAAGAGAT CGCGCTCAAC GACATCAAAT GGTTCGTCGC CAACATCGGC GCGCCGTACC AGGCCATCGT CACCGATGGT CCCTTCCCGG TGAACAATAT CCAAAAAGGG CTGCTCGATG TGGATGTCGA ACTGCCGGTC GGGCCGCAAT TGCGCGGTTG GCATGCCGGC ACCGCCACTA ACACGGTTCC CGGGGCCGCC GCAATCACCC TCACCGGCGT CGACGAATCT ACCGTGCGGC AAGCATTCTG CCAGAGCGGC AACATCGCTC CAGATATCGC CGAGCGATTG CATATCAACG CAACAGCGCA AGGCGTCACG ATTGAGGCCA CCGGTGTCGC CGGTCATGCC TGCCAGCCGT CCGGTACCGT AAACGCTATA GCGGTGCTCA CTACGGCGCT TGCCCGGTCC GGTCTGCTCG AAGGCCGTGA CCTCACTGCA GCGCAGGCGA TTGCCCAATG GACAAAAGAC TCATATGGCA CCGGCTTGGG TATCGATTGC GAGAATGCGG AAAGCGGACC GACTACCGCC AATGGTGGTT TGATTATACC GGCGAATGAG TTCGCTGAAG CAGACAAGGT ATTAGGCGCG GTATCAGGTG AGACTTCTGA AGATGCCATC GTATTGCACT TCGACATCCG TTATGCGGTA GGCCAGGCAC ACGAACAAAT CATCGAGCGT ATTCAAGCAC AAGCCGAAGC GGCGGGCGGC CGCATTGTCG ACATCCTTAA CGATGACCCA TACTACGTGC AGGCTGACGA CCCGCGTGTC CAGTTGCTCA CCGCAACCTA CAACGACGTG CTCGGTTGCG AGGCTCGACC CGTGGCTGTC GGCGACGGCA CCCACGCCCG CTTTATCCCG CGCGCACTCA ACTTCGGTCC CGAATTCCAT GCCGACCATG TGCCGGCGGT CGACGGCATC GACCTGGAGA CCCCGCCATT CATCGCACCA GGTGCCGGCA ACGCGCACGG TGCCGATGAA TGGGCCTCGC TGAAAAACCT GAAAACAGCG TTTGTCCTAT ATGCGTTAGG CCTAGTGCGT CTCGACCAAT ACCTGCAATA G
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Protein sequence | MLAKAGRDGL PTRDYTGHVM EVVYPQENVE TDRDIAFVDH LDVVPADDGW THDAFDPQVI GDIVIGRGSL DNKGVALTSY FLLRFFKEHD HRFRHRVRIL FGGSEEIALN DIKWFVANIG APYQAIVTDG PFPVNNIQKG LLDVDVELPV GPQLRGWHAG TATNTVPGAA AITLTGVDES TVRQAFCQSG NIAPDIAERL HINATAQGVT IEATGVAGHA CQPSGTVNAI AVLTTALARS GLLEGRDLTA AQAIAQWTKD SYGTGLGIDC ENAESGPTTA NGGLIIPANE FAEADKVLGA VSGETSEDAI VLHFDIRYAV GQAHEQIIER IQAQAEAAGG RIVDILNDDP YYVQADDPRV QLLTATYNDV LGCEARPVAV GDGTHARFIP RALNFGPEFH ADHVPAVDGI DLETPPFIAP GAGNAHGADE WASLKNLKTA FVLYALGLVR LDQYLQ
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