Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0599 |
Symbol | spoU1 |
ID | 6363354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 684880 |
End bp | 685758 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642679757 |
Product | rRNA methylase |
Protein accession | YP_001954543 |
Protein GI | 189439462 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.441965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTCA TCACGCTGGA CACCGTCGAC GACCCGCGCG TCGAAGCGTA TGTGAGCCTC ACCGAAATGC AGTTGCGTAA TCGCTTGGAA CCAGCCAAGG GCGTGTTCAT CGCCGAGTCC CCCAAGGTTA TCGACCGCGC GCTGGCCGCT GACCGCGAAC CGCTGTCACT GCTGGTCGAG GAACCTTGGC TGGAGGGCAT GAAAGACACC TTCGACTTCA TCGACGGGCG CTGGGGCGCG GATATTCCCG TCTACGTGGC CTCACCTGAG CAGCTCAAGC GTCTGACCGG CTACCGTTTG CATCGCGGCG CCCTATGCGC GATGCGACGC TGGCCGTTGC CCTCCGTAGC CGAGGTCTGC AAGAGCGCCC GCCGCGTGGC AGTAATGGAA AACATCGTGG ACCACACCAA TGTGGGCGCA CTGATGCGTT CGGCGGCCGC GCTCGATGTG GATGCCGTGC TGGTCACACC CTCCTGCGGT GATCCGCTGT ACCGACGCGC CGCCCGCGTG TCGATGGGCA CCGTATTCCA GATTCCGTGG ACCCGTATCA CCGGGTTCAA CGACGACGGC ACCGAAAACA AGCATTACTG GCCGTTCCAG GGCATCGACG AGTTGAAGTC GCTGGGCTTC ACCACCGTGG CCATGGCATT GGAGGATCGT TCGATTTCGT TGGACGAACT GACACGCCGT CTGCACGCGC CTGCCGAAGA TCCGACGCAT ATCGACAAGC TCGCGCTGAT CTTCGGTACC GAGGGCGACG GCCTGTCCCA CCATACGATT GCCCGCGCCG ATTTGACCGT GAAGATTCCG ATGAGCCACG GCGTGGATAG CCTGAACGTG GCGGCATCCA GCGCAGTGGC GTTCTACGCG ACACGCTAA
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Protein sequence | MQFITLDTVD DPRVEAYVSL TEMQLRNRLE PAKGVFIAES PKVIDRALAA DREPLSLLVE EPWLEGMKDT FDFIDGRWGA DIPVYVASPE QLKRLTGYRL HRGALCAMRR WPLPSVAEVC KSARRVAVME NIVDHTNVGA LMRSAAALDV DAVLVTPSCG DPLYRRAARV SMGTVFQIPW TRITGFNDDG TENKHYWPFQ GIDELKSLGF TTVAMALEDR SISLDELTRR LHAPAEDPTH IDKLALIFGT EGDGLSHHTI ARADLTVKIP MSHGVDSLNV AASSAVAFYA TR
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