Gene BLD_0587 details

Gene Information

• Locus tag: BLD_0587
• Symbol: rplY
• ID: 6362754
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: -
• Start bp: 671511
• End bp: 672131
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642679744
• Product: 50S ribosomal protein L25/general stress protein Ctc
• Protein accession: YP_001954531
• Protein GI: 189439450
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1825] Ribosomal protein L25 (general stress protein Ctc)
• TIGRFAM ID: [TIGR00731] ribosomal protein L25, Ctc-form

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTACCA CCATTAAGCT TGAGGGCGAG GCCCGTTCCG AGTTCGGCAA GGGCGTTGCT 
CGTCGTCTGC GCGTTGCCAA CAAGATTCCG GCCACCATCT ACGCCGGCGG CGAAGAGCCC 
GCCTTCGTGA CCTTGCCGAT GCGCGAGACC ACCCTGGCCC TGCGTCACAC CAACGCCCTG 
TTCACCATCG CTTTCGACGG CAACACCAAG ATGGCCGTCG TCAAGGACGT GCAGAAGAAC 
CCGGTCAAGC GCATCATCGA GCACGTTGAC TTCCTTGAGG TCAAGGCCGG CGAGAAGATC 
GACGTCGAGG TGCCGGTCTT CGTTGAAGGC ACCCCGAAGG GCGCTGCTGT GGCATTCGTC 
GACATTCAGG AGCTCAAGGT TCGCGCTGAC GTCGCCAACC TGCCTGAGAA GATCGTTGTG 
AGCGTCGAGG GCCTAACCGA CGGCACCAAG GTGTTCGCTA AGGACGTTGT TCTGCCTGAA 
GGCGTTGAGC TCGACGTTGA GGACCCGGAA GAGTCCGTTG TCACCGTTGA GGTGCCGGAA 
GATGCTTCTG AGTCCACCGC CGCTCCGGAA GCTGCTGCTC CGGCTGCCGA CGCTGCTGCT 
CCGGCTGCCG ACGCCAAGTG A 

 

Protein sequence

MATTIKLEGE ARSEFGKGVA RRLRVANKIP ATIYAGGEEP AFVTLPMRET TLALRHTNAL 
FTIAFDGNTK MAVVKDVQKN PVKRIIEHVD FLEVKAGEKI DVEVPVFVEG TPKGAAVAFV 
DIQELKVRAD VANLPEKIVV SVEGLTDGTK VFAKDVVLPE GVELDVEDPE ESVVTVEVPE 
DASESTAAPE AAAPAADAAA PAADAK