| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0577 |
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| Symbol | norM1 |
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| ID | 6362810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 659840 |
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| End bp | 661204 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642679734 |
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| Product | Na+-driven multidrug efflux pump |
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| Protein accession | YP_001954521 |
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| Protein GI | 189439440 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00131825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACG AACTCTTCGA AAAGGCGCCG ATTCCGGAGG CGTATTTCTC GCTGGCGATG
CCCGTGGTGC TCAGCATGCT GATCACCTTG GTGTACAACA TGGTCGACAC CTATTTCATC
GCGCATACGG GAAACACCGA TATGGTGGCG GGCGTCTCCC TCACCGCGCC AGTGTTCACC
GTGATGATCG CCCTCGGCGA CATCTTCGGC CTCGGCGGCA GTTCGGTCAT CTCGCGCTTG
TTCGGCCAAC ACCGGTTCGC CGACGGCAAG CGACTCAGCG CGTTCTGCTT CTATGCCGCC
ATCGCCACCG GCCTGCTGAT TCTGGTGCTG GGCCTGGCGT TCCGCGACCC GATGCTCGCG
CTGCTCGGCG CCACTGACGA CACTTGGCAG TATGCCTCCG ACTTCTACAC GCTGATCATC
GTCGGCTCGC CGTTCATCAT CGTGTCGATG ACGCCGTCCA ACCTGCTGCG CACCGAAGGC
CACGCCGTGC AGTCCATGAT CGGTTCGGTG GCCGGCACGG CGGTCAACAT CGTGCTCAAT
CCCCTGTTCA TCCACGGATT CGGCTGGGGT GCTGCGGGTT CGGCCGGTGC CACCGTGATC
GCCAACATCT GCACCGACGC CTATTTCGTC TGGTTCACGC TGCGTCACAG CAGCAACCTG
TCCATCGACC CGCGGACCGT CATCGACCGC GCGCGCCGGC GTCTGGCGGT CACGGCCCGG
GAGGTCGGGA GCATCCTCGC CATCGGCATC CCCTCGGCGA TCACGAACCT CACGCAGAGC
GTCGGCATCG TCATGATCAA CCTGTTCCTG CTCCCCTACG GTACCGACGC GGTAGCCGCG
ATGGGCATCG CGCTGAAAGT CATCATGATC GCGGTGCTGG TTTTCGTGGG ATTCGCGTTC
GGCGCGCAGC CGCTGATCGG CTACAACTAC GGCGCCCGCA ATATGCCTCG ACTGCGCGGC
ATTCTGCGTT TTTCCTACCT GTTCCTGTCC CTGTTCGCCC TGGTGATGAC CGTGGTGCTC
AGCCTGTCCG ACCGTCTACT GATGGGATTC TTCATCGAGG ACGCCACCAT CATCACGCTG
GGCGCCGGCA TGCTGCGGGT TCAGCTGCTG AGCCTGGTGT GCGTAGCCGT CGTGATGGTC
ACGACCTGCA CCTTCCAGTC CGCAGGCAAG GCGGTCGGCG CCTTTGTGCT GTCGATCAGC
AGGCAGGGTG TGATGCTGGC GATTACCCTG TTCGTCGGCT CCCGGCTGGC CGGCTATCAG
GGTGTAATCG CCGCGCAGGC CATCGCCGAT CTGCTGACCG CGATTGTGGC GGTCATCCTG
TTCGTCGTGA TGTTGCCTGA GCTGCGCAGT CGGAAAGCTC GCTGA
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| Protein sequence | MDNELFEKAP IPEAYFSLAM PVVLSMLITL VYNMVDTYFI AHTGNTDMVA GVSLTAPVFT
VMIALGDIFG LGGSSVISRL FGQHRFADGK RLSAFCFYAA IATGLLILVL GLAFRDPMLA
LLGATDDTWQ YASDFYTLII VGSPFIIVSM TPSNLLRTEG HAVQSMIGSV AGTAVNIVLN
PLFIHGFGWG AAGSAGATVI ANICTDAYFV WFTLRHSSNL SIDPRTVIDR ARRRLAVTAR
EVGSILAIGI PSAITNLTQS VGIVMINLFL LPYGTDAVAA MGIALKVIMI AVLVFVGFAF
GAQPLIGYNY GARNMPRLRG ILRFSYLFLS LFALVMTVVL SLSDRLLMGF FIEDATIITL
GAGMLRVQLL SLVCVAVVMV TTCTFQSAGK AVGAFVLSIS RQGVMLAITL FVGSRLAGYQ
GVIAAQAIAD LLTAIVAVIL FVVMLPELRS RKAR
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