| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0548 |
|---|
| Symbol | |
|---|
| ID | 6362868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 627389 |
|---|
| End bp | 628027 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642679705 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001954492 |
|---|
| Protein GI | 189439411 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCA ATGGCAACAC GGCATTTCGT TTCCGAGTCA CTTTGCGCCT TGACGGGCGT
GAATGCTGGC GGGAGATTCT GGTGCCGGCA TCATTGACGT TCTTCGATTT GCATGCGGTA
TTGCAGGAAT GCTTTATGTG GTACGGCGAG CATCTGTTCT GCTTCTGCGC CACATTTCCG
AATGGGAAGC AGGTGCAAGT GGAAGAATTG TGGGGAGAAG AGCCCTCATA CCATGAGGCG
AAATACGAAC AATATATGCC GGTGGAGCCG TTGCCGGAAG TTCGCGTTGC TTCGGAAACC
GAGCTGGGCG ACGTGTTTCC CAAGGTGCGT ACCGCTCGCT ATTACTACGA TTATGGTGAC
GATTGGATCC ATGATATTAA GCTGCTGCGT ACCTACCGCA GCGTGCACGT TGCGGATCCT
CAGCTTTGGG ATGGGGCTGG GGATGCGCCT CCGGAGGATG TCGGCGGGGT GTATGGGTTC
GAGCGGTTCC TTGATACCTT GGGCAATCCC GAAGATGAAG AACATGATGG CATGGTTGAG
TGGGCCGAGG ACCAGATGTG GGATCGTTTC ACGCTGAACC GCCATCGTGA GCGTCTGTTC
CGTTGGCACA AGCACCGTGA CATGATGTTG CATGGGTGA
|
|---|
| Protein sequence | MAGNGNTAFR FRVTLRLDGR ECWREILVPA SLTFFDLHAV LQECFMWYGE HLFCFCATFP
NGKQVQVEEL WGEEPSYHEA KYEQYMPVEP LPEVRVASET ELGDVFPKVR TARYYYDYGD
DWIHDIKLLR TYRSVHVADP QLWDGAGDAP PEDVGGVYGF ERFLDTLGNP EDEEHDGMVE
WAEDQMWDRF TLNRHRERLF RWHKHRDMML HG
|
|---|
| |