| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0538 |
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| Symbol | metE |
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| ID | 6363352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 616819 |
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| End bp | 619122 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642679695 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_001954482 |
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| Protein GI | 189439401 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.952319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACTC TGACTTCCGT CTCCGGCTTC CCCCGCATCG GGCAGAACCG CGAACTGAAG
AAGATCATCG AAGGCTACTG GAAGGGTGCC AACGACCTCG CCGCCGTCAA GGCCACCGCC
GCCGAACTGC GCGCCAAGCA CTGGAAGCTG CAGCAGGCCG CCGGCATCGA CCTCATTCCC
AGCAACGACT TCAGCTACTA CGATCAGATG CTGGACACCG CCATCCTTCT CAACGTGATT
CCGCAGCGTT ACGCACGTCT CTCCTTCGAC AACCAGGAGG ACACGCTCTT CGCCATGGCC
CGCGGCTACC AGGGCGACAA GGGCGACGTG ACCGCCCTGC CGATGAAGAA GTGGTTCACC
ACCAACTACC ACTATCTGGT GCCCGAAGTC GAGTCGGCCG CGGAGATCAA GCTCAACTCC
ACCAAGCCGT TCGACGAGTT CAACGAGGCC AAGGCGCTGG GCATCGACAC CAAGCCCGTG
TTCATCGGCC CGTACACGTT CCTGAAGCTC GCCCGTACCC CGGAAGCCAC CGAACTCGAG
CTCGACAAGG GCCTGGTCAA CGCCGTGGCC GCCGTCTACG TCGAAGTGCT CGCCAAGTTC
AACGAGCTCG GCGCCGCATG GGTCCAGCTC GACGAGCCGT ACCTCGTGCT CGACAAGGAG
CCGGGCGACG TTGAACTCTT CAAGACCCTG TACACCAAGA TCCTGTCCGC CAAGGGCAAT
GTCAAGGTGC TGCTCAACAC CTACTTCGGC CACATCGCCG ACGTGTACGA GACCGTCAAC
CTGCTCGGCT TCGACGGCAT CGGCCTGGAC CTCAACGAAG GTCGCGAGGA GAACCTCGAA
GCCGTCGCCA AGTATGGCGT GGCCTCCAAC ACCACCATCT TCGCCGGCGT GATCAACGGC
CGCAACATCT GGCGCAACAA CTACGCCACC TCCCTCGGCC TGGTCGACGC CCTGAAGCAG
GTCACCGCCA ACGTGGCCGT CTCCACCGCA TCCTCCCTGC TGCACGTGCC GTTCAGCACC
GAAGGCGAGA CCGGCATCCC GGCCGAAGAC CTCAAGCACT TCGCGTTCGC CGTCCAGAAG
CTCGACGAGC TCAAGGAAGT CGCCGCCCTG GCCGACGCCA CCGAGGACGA GAAGAAGGCA
TCCGCCGCCC TCGCCGCCAA CCAGGCTCTG TTCGACGGCA CCCGCGTGGC CGCCGACCCG
GCCGTCGCCG AGCGCATCGG CAAGCTGTCC GACGCCGACT ACGTGCGTCA GCCTGCCCGC
GAGGAGCGTC AGGCCCTGCA GCGCGAGGCC CTCGGCCTGC CGCTGCTGCC GACCACCACC
ATCGGCTCCT TCCCCCAGAC CAAGGAGATT CGCGCCGAGC GTGCCAAGCT GCGCAAGGGC
GAGGTCACCA AGGAAGCCTA CGACGAGTTC ATCAAAGCCC AGATCGACGC CGTCATCAAG
AAGCAGGAGG AGATCGGCCT CGACGTGCTG GTCCACGGCG AGTTCGAGCG TAACGACATG
GTCGAATATT TCGGCCAGAA CCTCAACGGC TTCCTGTTCA CCAAGAACGC TTGGGTCCAG
TCCTACGGCA CCCGTTGCGT CAAGCCCCCG ATCGTCTGGG GCGACGTTTC CCGCGCCAAC
CCGATTACCG TGGAATGGTC CGCGTACGCC CAGTCCAAGA CCGACCATGT GATGAAGGGC
ATGCTCACCG GCCCGGTGAC CATCCTCAAC TGGTCCTGGC CGCGCGAGGA CATCACCCAC
GAGGAGCAGA CCAAGCAGCT CGCCCTCGCC ATCCGCGACG AAGTGCTCGA TCTCGAGGCC
GCCGGTATCA AGGTCATCCA GATCGATGAG GCCGCCCTGC GTGAGAAGCT GCCGCTGCGC
AAGTCCGACT GGCACGTCAA GTACCTCGAC TGGGCCGTTC CGGCCTTCCG TCTGGTGCAC
TCCGCCGTCA AGCCGACCAC CCAGATCCAC ACCCACATGT GCTACTCCGA GTTCAACGAC
ATCATCCGCG ACATCGACGC GATGGATGCC GACGTGATCT CCTTCGAAGC CTCCCGTGGC
GATCTGGTGG TGCTCGACGC CATTCATGAC GCGCACTTCG AGACCGAGGC CGGCCCGGGC
GTCTACGACA TTCACTCCCC GCGTATTCCT TCCGAGAAGG AGATCGAGGA TCGTATCTAC
GAGATCCTTG ACAAGATGGA CGTCAAGAAG GTGTGGATCA ACCCTGACTG CGGTCTGAAG
ACCCGTGGTA ACGCCGAGAC CTGGCCGAGC CTGGAGAACC TGGTCGCCGC CGCCAAGGCC
GTGCGCGCCA AGCTCGACAA GTAG
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| Protein sequence | MSTLTSVSGF PRIGQNRELK KIIEGYWKGA NDLAAVKATA AELRAKHWKL QQAAGIDLIP
SNDFSYYDQM LDTAILLNVI PQRYARLSFD NQEDTLFAMA RGYQGDKGDV TALPMKKWFT
TNYHYLVPEV ESAAEIKLNS TKPFDEFNEA KALGIDTKPV FIGPYTFLKL ARTPEATELE
LDKGLVNAVA AVYVEVLAKF NELGAAWVQL DEPYLVLDKE PGDVELFKTL YTKILSAKGN
VKVLLNTYFG HIADVYETVN LLGFDGIGLD LNEGREENLE AVAKYGVASN TTIFAGVING
RNIWRNNYAT SLGLVDALKQ VTANVAVSTA SSLLHVPFST EGETGIPAED LKHFAFAVQK
LDELKEVAAL ADATEDEKKA SAALAANQAL FDGTRVAADP AVAERIGKLS DADYVRQPAR
EERQALQREA LGLPLLPTTT IGSFPQTKEI RAERAKLRKG EVTKEAYDEF IKAQIDAVIK
KQEEIGLDVL VHGEFERNDM VEYFGQNLNG FLFTKNAWVQ SYGTRCVKPP IVWGDVSRAN
PITVEWSAYA QSKTDHVMKG MLTGPVTILN WSWPREDITH EEQTKQLALA IRDEVLDLEA
AGIKVIQIDE AALREKLPLR KSDWHVKYLD WAVPAFRLVH SAVKPTTQIH THMCYSEFND
IIRDIDAMDA DVISFEASRG DLVVLDAIHD AHFETEAGPG VYDIHSPRIP SEKEIEDRIY
EILDKMDVKK VWINPDCGLK TRGNAETWPS LENLVAAAKA VRAKLDK
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