| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0524 |
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| Symbol | |
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| ID | 6363878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 601356 |
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| End bp | 601985 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642679681 |
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| Product | putative HAD superfamily hydrolase |
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| Protein accession | YP_001954468 |
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| Protein GI | 189439387 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.172538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAACT CCCCCATCAC CGACGTGATT TTCGACTTCT GCGGCGTGCT GCTGGACTGG
AACACCCGCG CATGCCTGGA AGGCCGATTC CCCGATGAGA TCGTGGAACG CATCTGCGCC
GACGACGACC CCTGCGGCTT CTTCCGCTAC GAGGACCGCA TGGACACCGG CGAGGATTTC
GCGGACATCT ACCCGGATGT GGTACGCGAA CAAGGCCAGG AACTCGCCGA CATCTTCAAG
TTCTACATCG GCCACTACGC GGACGCGCTG CCCCGCACGC TTCCGGGCAT GGTCGAGCTG
CTGGCGGATT TGAAGGCCCA CGGCTACGGC GTATGGGGTC TGACCAACTG GTCGCATGAG
ACCTTCCACC TGGCCTTCGA GAAGTACCCG CGCCTTGAAC AGCTGTTGCA GGGCACCGTG
GTCTCCGGCG TGGAGAAGAT GCATAAGCCG AACGCCGACA TCTACGAGCT GGCCCTGACC
CGTTTCGGCC TCACGGCCGA GCGCTGCGTG TTCTTCGACG ACACCGCCAA GAACATCGTC
GGCGCCAACG AGGTCGGCAT CCACGGCATC CTCTTCGAGA ACGCGTTGCA GGCACGCGAA
TCGCTCGCAG AACTCGGCGT ACGTCTGTAA
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| Protein sequence | MANSPITDVI FDFCGVLLDW NTRACLEGRF PDEIVERICA DDDPCGFFRY EDRMDTGEDF
ADIYPDVVRE QGQELADIFK FYIGHYADAL PRTLPGMVEL LADLKAHGYG VWGLTNWSHE
TFHLAFEKYP RLEQLLQGTV VSGVEKMHKP NADIYELALT RFGLTAERCV FFDDTAKNIV
GANEVGIHGI LFENALQARE SLAELGVRL
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