| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0487 |
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| Symbol | lysP1 |
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| ID | 6364119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 572980 |
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| End bp | 574380 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642679644 |
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| Product | amino acid transporter |
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| Protein accession | YP_001954431 |
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| Protein GI | 189439350 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.219434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCAG CCGGCACACC CAAGGACGAT ACCGGCCTTG AACGGAAGAT GGAGTCGCGT
CACCTGACGA TGATCTCCCT GGGCGGCGTG ATCGGCACCG GCCTGTTCGT CAGCTCCGGC
TACGCGATTC ATCAGGCGGG ACCGTTGGGC GCGATCCTCG CTTACGCGGC CGGCTCCCTG
CTCGTCTACT GCGTGATGGT GTCGTTGGGC GAGCTGTCCG TGGCCATGCC GTACGCCGGC
AGCTTCCACA TGTATGCGAA GCGGTTCATC GGCCCCGGCA CCGCGTTCAC CATCGCCATC
CTGTATTGGC TGAACTGGGC GGTGGCGCTC GCCTCCGAAT TCACGGCCGC AGGGCTGTTG
ATGCAGCGAT GGTTCCCGCA TTCGCCGTCC TGGGTGTGGT CGGCCGTGTT CATTGTGGTG
GTGTTCGCGC TCAACATCAT GTCCGTGCGG CTGTACGGCG AGGCGGAATT CTGGTTCGCG
TCAATCAAGG TGTTCGCCAT CATCGCGTTC ATTGTGATCG GCCTGCTGGC GATCTTCGGC
GCCATACCGA TTGCCGGTCA TGATTCCGCG CCGTTGCTGG GCAACTTCGT GGCCGGCGGC
TGGTTCCCGA GCGGCATCGC GCCGATTTTC TCGACTTTGC TGACCGTGGT GTTCGCGTTC
TCCGGCACCG AAGTGGTGGG CGTGGCGGCC GGCGAAACCA AGGATCCCTC GCGTGCGATT
CCCAAGGCCG TGCACACCAC GGTGCTGCGC CTGGCGATTT TCTTCATCGG CTCGATTCTG
GTGATGGCGG CCTTGATCCC CTGGCATCAG GCCGGCGTGG ATACGAGCCC GTTCGTGCTG
GTGTTCCAGT CAATCGGTAT GCCGTTCGCC GGCGACATCA TGAACTTCGT GGTGTTGACG
GCCGTGCTTT CCGCCGCGAA CTCCGGCCTG TACGTGTGTT CGCGCATGGT GTGGTCGCTG
GCCAAGGAGC GGCTGATTCC CGAACGTTTT GCTAGGACGA ATTTCCGTGG TGTGCCGGTG
TGGGCCGTGC TGTTCAGCAT GGCGGGCTCA CTGCTGGCGT TGCTGTCTTC CGTGATCGCC
GCCTCGACCG TGTATCTGGT GTTGGTCGCC GTGTCAGGTT TGGCGACGCT GGTGGTGTGG
TTCTCCGTAT GCGTGTGCCA TATCCGTTTC CGGCGCGAAT GGGCGCGGGA TGGGCACAGC
GCCGATGAGC TCGGCTATCG TGCGCCCGGT TTCCCGGTGC TGCCGTGGCT GGCCATCGTG
ATGTGCATCG GCGCGCTGGT GCTCGTGGTG CTCGATGATA CGCAGCGTTC GACCCTGTAT
TGCATGATCC CGTTCGTCGC CTGCTGCTAC GCGGCTTATT ACGCACTCGA ACGGCAGCGC
AAACGCGAAA ACAACGCCTA A
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| Protein sequence | MAAAGTPKDD TGLERKMESR HLTMISLGGV IGTGLFVSSG YAIHQAGPLG AILAYAAGSL
LVYCVMVSLG ELSVAMPYAG SFHMYAKRFI GPGTAFTIAI LYWLNWAVAL ASEFTAAGLL
MQRWFPHSPS WVWSAVFIVV VFALNIMSVR LYGEAEFWFA SIKVFAIIAF IVIGLLAIFG
AIPIAGHDSA PLLGNFVAGG WFPSGIAPIF STLLTVVFAF SGTEVVGVAA GETKDPSRAI
PKAVHTTVLR LAIFFIGSIL VMAALIPWHQ AGVDTSPFVL VFQSIGMPFA GDIMNFVVLT
AVLSAANSGL YVCSRMVWSL AKERLIPERF ARTNFRGVPV WAVLFSMAGS LLALLSSVIA
ASTVYLVLVA VSGLATLVVW FSVCVCHIRF RREWARDGHS ADELGYRAPG FPVLPWLAIV
MCIGALVLVV LDDTQRSTLY CMIPFVACCY AAYYALERQR KRENNA
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