| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0482 |
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| Symbol | trpA |
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| ID | 6364136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 568497 |
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| End bp | 569366 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642679639 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001954426 |
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| Protein GI | 189439345 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0647484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAATG AAGCAACCAC GCCGTCCGGC CAGCCGCTGG GCATCAGCCA CAAGCCCAGC
AAGTCGGTCG CTATGTTCAC CAAGTTCAAG GCCGAGAACA AGCCTGCCTT CATCGGCTAC
CTGCCCTACG GCTTCCCCAA CCCGGACGTC TCGCTTGACG CCTTCAAGAC GATGGTCGAG
CACGGCGTCG ACGCCGTGGA GATCGGCCTG CCGTACTCCG ACCCGGTCAT GGACGGCCCG
GTCATCCAGG CTGCCGCCTC CATCGCCCTG AACAACGGCG AGACCATCAA GCGCGTGTTC
GAGGCCGTCG AAACCGTGGC CAACGCCGGC GGCGTGCCGC TCATCATGAG CTACTGGAAC
CTCGTGTACC ACTACGGCGT CGAGCGTTTC GCCCGCGACT TCGAGAACGC CGGCGGCGCC
GGCCTCATCA CCCCGGACCT CATCCCGGAC GAGGCGGGGG AGTGGATCGA AGCCTCCGAC
CGTCACGGAC TCGACCGCAT CTTCCTGGTC TCCCCGGACT CGTCCACCGA GCGCCTCGAA
ACCGTGGCCC GCAACGCGCG CGGCTTCGTG TATGCGGCCG CCCGCATGGG CGTCACCGGC
GAACGCGCCA CCATCGACGC CTCGCCCGAA CTCCTCGTGG AGCGCACCCG TCAGGCCGGT
GCCGAGAACG TGTGCGTGGG CATCGGCGTG TCCACCGCCG AACAGGGCGC CAAGGTCGGC
TCCTACGCGG ACGGCGTCAT CGTCGGCTCC GCGCTCGTGC ACACCCTGCT CGCGGACGAC
AACAAGACCG CACGCGACCC GAAGGAAGGC TTGAAGCTGC TCGCCGCCAA GAGCGAGGAA
CTGGCCGAAG GCATCCACAA CGCCCGGTGA
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| Protein sequence | MTNEATTPSG QPLGISHKPS KSVAMFTKFK AENKPAFIGY LPYGFPNPDV SLDAFKTMVE
HGVDAVEIGL PYSDPVMDGP VIQAAASIAL NNGETIKRVF EAVETVANAG GVPLIMSYWN
LVYHYGVERF ARDFENAGGA GLITPDLIPD EAGEWIEASD RHGLDRIFLV SPDSSTERLE
TVARNARGFV YAAARMGVTG ERATIDASPE LLVERTRQAG AENVCVGIGV STAEQGAKVG
SYADGVIVGS ALVHTLLADD NKTARDPKEG LKLLAAKSEE LAEGIHNAR
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