Gene BLD_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0480 
Symbolrpe 
ID6364134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand- 
Start bp566695 
End bp567363 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID642679637 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001954424 
Protein GI189439343 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0249327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATA TCGCAATCGC ACCCAGCATC CTGTCCGCTG ACTTCTGCAA CCTCGAACGT 
GATCTCAAGG CCATCGCCAA CGCCGACCTG GTCCACGTCG ATGTCATGGA CCATCATTTC 
GTGCCGAACC TGACCCTGGG CGAGCCGATC GTCGGCCGCA TCTGTCAGGT CACCGATCTG 
CCGGTCGACG TGCACCTCAT GATCGAGGAC CCGGACCGTT GGGCTCCCGA ATACGCCAAG 
CTCGGCGCCG CCTCCATCTC CTTCCACATG GGTGCCACCC ACGCCCCCGT GCGTCTGGCC 
CGACAGCTGC GCGAGATGGG CTGCAAGGCC TGCTTCGCCG TGCGTCCGGC CGAACCGGTC 
GAGCCGATCT TCGATATCCT CGACGAGTTC GACATGGTCC TCATCATGAC CGTTGAGCCC 
GGCTTCGGCG GCCAGAAGTT CCTCGACAAC CAGATGGCCA AGGTCCGCCG CCTGCGCGAT 
GAGATCACCC GCCGTGGCTT GAAGACCCGC ATCCAGGTCG ATGGCGGCGT GAGCCCCAAG 
ACCGCGCACA TCGTGGCCGA AGCCGGCGCC GACGTGCTCG TTGCCGGTTC CGCCGTGTAC 
GGCGCCGAGA ATCCCGCCCA AGCCATCGAC GACATCCGCG CCAAGGCCGA GGCCGCGTTC 
AAGGCCTGA
 
Protein sequence
MSNIAIAPSI LSADFCNLER DLKAIANADL VHVDVMDHHF VPNLTLGEPI VGRICQVTDL 
PVDVHLMIED PDRWAPEYAK LGAASISFHM GATHAPVRLA RQLREMGCKA CFAVRPAEPV 
EPIFDILDEF DMVLIMTVEP GFGGQKFLDN QMAKVRRLRD EITRRGLKTR IQVDGGVSPK 
TAHIVAEAGA DVLVAGSAVY GAENPAQAID DIRAKAEAAF KA