| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0467 |
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| Symbol | |
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| ID | 6363734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 556701 |
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| End bp | 559292 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642679624 |
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| Product | superfamily II RNA helicase |
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| Protein accession | YP_001954411 |
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| Protein GI | 189439330 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGTC ACCAACACCA TAAGGGCAAT GCCGATTCCC AGACGCTGAG CCCTTCGCAG
CGGTACGCAT CATTCCAAAA AGTCCAGCGC CATCGGGCGT CCGCAGCAGC GCGATTCGCC
GAATCCCTGC CCTTCGAACT GGACGACTTC CAGACCGAAG CCAATGACGC GCTCGAAGCC
GGCAGCAACG TACTGGTCGC GGCCCCAACC GGTGCCGGCA AAACCGTAGT GGCGGATTTT
GCCATTTATC TCGCCCAGGA ACGCAACGTC AAAGCCTTCT ATACCACACC GATCAAAGCG
CTGAGCAATC AGAAATACCA TGATCTGGTC GACGTGTACG GCCCGGACAA GGTAGGCCTG
CTCACCGGCG ACACCTCGAT CAACTCCGAG GCGGACATCG TGGTCATGAC CACCGAAGTG
CTGCGCAACA TGCTCTACGA GCGTTCCACC ACGCTGAACG CACTGCGCTA CGTGATTCTC
GACGAAGTGC ACTATCTGGC CGACCGGTTC CGCGGGCCCG TGTGGGAGGA AGTCATCATC
CACCTGCCCA AGACGGTCAA GATCGTCGGC CTGTCCGCTA CCGTGTCCAA CGTGGAGGAT
TTCTCCAACT GGATTGCCTC GGTGCGAGGC GACACCAAAC TGGTGATCAG CGAACACCGC
CCCGTGCCTT TGGAACAGCA CGTCATCGTG CAGGCGGACG AACACACCGA GCCTGAGGTG
CTGGATCTCT ATCGCCGCGA CGGCAACGGC GAGCAGACCA CCAAGCTCAA CGCCGAACTC
ATCAACCGGC TCGACCAGTT GGACCGCAAG GCCGCACGCC GGCGCGGCGA GGAACGCCCC
GATAAGCGCA AGGGCTTCGG CAGAGGCCGC GGCGGCAAAG GCGCCAAGGG CCATGCCCCG
AAAGCGGAAC GCCACACCCC GCGCCGCTGG GCCGTGGTGG ACGAGCTTAA CTTTCTGGGA
ATGTTGCCCG GCATCTACTT CATCTTCTCG CGCAACGGTT GTGACCAGGC CGTGGAACAG
TGTATCAACG CTGGACTGGA GCTCACCACC GATGAGGAAG TGACCAAGAT TCGCCGCATC
GTGGATGAGA TGGTGGAGGG GCAACTCACT CAGGAAGACC TGAAAGCCCT GCAGTTCTCC
AAGTTCCGCT TTGCGTTGGA AGAAGGCTTC GCTTCGCATC ATGCCGGCAT GATTGCCCTG
TTCCGCCAGA TAGTCGAACG ATTGTTCGAA GAAGGTCTGG TCAAAATGGT GTTCGCCACG
GAAACACTGG CCTTGGGCAT CAATATGCCG GCCCGCTGCG TGGTGGTAGA GAAACTCGAG
AAGTTCGACG GTACCGGTCA TGTGGGCCTG ACGCCCGGCG AATTCACGCA GCTCACCGGT
CGTGCCGGTC GGCGCGGCAT CGACACCATC GGCCACGCCA TCGTGGTTGA CCATCACGGT
TTTGTGCCCG CCACGGCCGC CGCGCTGTCA TCCAAGCGTG TCTACCCGCT GCACTCGAGC
TTCCGCCCCA CGTTCAACAT GGCCGTGAAC CTGCTCAACT CCAGCGACTA CGAGACCGCG
CACGTTACCC TGGACCAGTC GTTTGCCCAG TGGGAGGCCA ACGAATCGGC CTGGCAGCTG
GAATCGCAGA TCAACACACT GAAGAACGCG CTGGCCGGAT ACGAACAGGC GTTCGCATGC
GAACACGGCG ACTTCAAACA GTTCATGACC CTGCGTATGG AGCTGAGCGA CATCGAAAAG
GAAGGCCGCC GCAAACTGAA GCACGAAGTG TTCCTGACCG ATCAGGAGCG TTCACGCGCC
TTCCAGAACC TTGACCAGCG CATTCGCGAT TTGCGCAAGG CGGAGCACGA GCATCCATGC
CGCAACTGCC CGGACCTCCA GCAACACCTC AAGTGGGGCC ACCGCTGGGC CCGCGAGACC
CGCGAACTGC AGCGCGTCAC CGATCGCTAC GACTCCCGTA CCGGGTCCGT GGCCCGTCAG
TTCGATCGCA TCTGCGATAT TCTCACCGGG CTTGGTTACC TCGAACGTCA TGTCAATGCG
GCCGGCCACA TTGACATGAC GTTGACCGAA AAAGGCTCGC TGCTGCGCCG CATCTACAGT
GAACATGACC TGGAACTGTG CGAGGCGCTG CTCGCCGGCA CGTTCGACAA GCTCGACGCC
AACGGACTGG CCGCTGTGCT CTCTTCACTG GTATACGAGG CCAGACGCGG GGGAGACGGC
GAACCGAGGC ACTACCCGGG CGGCATCTCC GGGTCCATCG CAATCGCTTC GTCCAAGCTC
AAGGGCATCT GTGAAGACAT CGATATCCTG TGCGAGGATC ACGGTCTGGA CGAGATGCAG
CGGCCGGACT TCGGCATTCT CGACATCATG TATGAATGGG CGGATGGCGG TTCGCTGGGA
TCGTGCCTGT ACGGCACCGA CATGACCGGC GGCGACTTCG TGCGCACTGC CAAACGACTG
GCTGACGTGC TGCAGCAGAT CGCTGTCGCC CAGCCGCTGC CGTTCGACGG GGGAGAGCGG
CTGGCAGGCC TCGCCCACGA AGCGGCCGAC CGGGTCAATC GTGGCGTGGT GGCCTACTCC
GGCGTGGACT GA
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| Protein sequence | MARHQHHKGN ADSQTLSPSQ RYASFQKVQR HRASAAARFA ESLPFELDDF QTEANDALEA
GSNVLVAAPT GAGKTVVADF AIYLAQERNV KAFYTTPIKA LSNQKYHDLV DVYGPDKVGL
LTGDTSINSE ADIVVMTTEV LRNMLYERST TLNALRYVIL DEVHYLADRF RGPVWEEVII
HLPKTVKIVG LSATVSNVED FSNWIASVRG DTKLVISEHR PVPLEQHVIV QADEHTEPEV
LDLYRRDGNG EQTTKLNAEL INRLDQLDRK AARRRGEERP DKRKGFGRGR GGKGAKGHAP
KAERHTPRRW AVVDELNFLG MLPGIYFIFS RNGCDQAVEQ CINAGLELTT DEEVTKIRRI
VDEMVEGQLT QEDLKALQFS KFRFALEEGF ASHHAGMIAL FRQIVERLFE EGLVKMVFAT
ETLALGINMP ARCVVVEKLE KFDGTGHVGL TPGEFTQLTG RAGRRGIDTI GHAIVVDHHG
FVPATAAALS SKRVYPLHSS FRPTFNMAVN LLNSSDYETA HVTLDQSFAQ WEANESAWQL
ESQINTLKNA LAGYEQAFAC EHGDFKQFMT LRMELSDIEK EGRRKLKHEV FLTDQERSRA
FQNLDQRIRD LRKAEHEHPC RNCPDLQQHL KWGHRWARET RELQRVTDRY DSRTGSVARQ
FDRICDILTG LGYLERHVNA AGHIDMTLTE KGSLLRRIYS EHDLELCEAL LAGTFDKLDA
NGLAAVLSSL VYEARRGGDG EPRHYPGGIS GSIAIASSKL KGICEDIDIL CEDHGLDEMQ
RPDFGILDIM YEWADGGSLG SCLYGTDMTG GDFVRTAKRL ADVLQQIAVA QPLPFDGGER
LAGLAHEAAD RVNRGVVAYS GVD
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