| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0437 |
|---|
| Symbol | |
|---|
| ID | 6363747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 521551 |
|---|
| End bp | 523107 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642679588 |
|---|
| Product | bifunctional HTH-domain containing protein/aminotransferase |
|---|
| Protein accession | YP_001954381 |
|---|
| Protein GI | 189439300 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAT CGGTGTTTGC GGAACGTCTG CGCAATGCGA TGAACAGCAG GGGATTGAAG
CAGGTCGATT TGGTGCACGC CGCCGAACAT CGTGGCGTAA AGATGGGCAA GAGCCACATC
AGCCAATATG TGGCCGGCAA GACCATGCCC CGCGAGGACG TGCTCGAATT CCTGGCCAGC
GAACTGGACG TCGACACGAA TTGGCTGCGC GGCGAGGAAT CCACCACGCA ATTGAACTCG
GACGCATCCA ACAGCGTCAC GGACGGCGAA CACGCCGCCA CACCGCTTGC CATGGGTGCC
GCCAAGCCCC AGACGGACAG CGAGATTCCC GTGGGCCGCC GCCGCACCTT CGGCAAATCG
CACAAGCTCG ACAACGTGCT CTACGACGTG CGCGGCCCGG TCGCCGACGA GGCGATGCGC
ATGGAGGCCA ACGGCACCCA CATCCTGAAA TTGAACATCG GCAACCCGGC ACCCTTCGGC
TTCCGCACGC CGGACGAAGT CGTCTACGAC ATGGCCCACC AGCTCACCGA CACCGAAGGC
TACTCGCCGT CCAAGGGCCT GTTCTCCGCG CGCAAGGCCA TCATGCAGTA CGCGCAGCTG
AAGAACATCC CGAACGTCAC CATCGACGAC ATCTACACCG GCAACGGCGT CAGCGAGCTC
ATCAACCTGT CCATGTCCGC GCTGCTCGAC ACCGGCGACG AAGTGCTCGT GCCCTCCCCG
GACTACCCGC TGTGGACCGC CTGCGTGAAC CTGGCCGGCG GCACCGCCGT GCACTACCTG
TGCGACGAAC AGTCCGAATG GTATCCGGAC ATCGACGACA TCCGCTCCAA GATCACCAGC
AACACCAAGG CGATTGTCAT CATCAACCCG AACAACCCCA CCGGCGCACT TTACCCAAAG
GAAGTGCTCC AGCAGATCGT CGACATCGCG CGCGAACACC AGCTCATCAT CTTCTCCGAC
GAAATCTACG ATCGCCTCGT CATGGACGGC CTGCAGCACA TCTCCATCGC CTCGATGGCC
CCGGACCTGT TCTGCGTGAC CTTCTCCGGC CTGTCGAAAT CGCACATGAT CGCCGGCTAC
CGCATCGGCT GGATGATCCT GTCCGGCAAC AAGCGCATTG CCAAGGACTA CATCGAGGGC
CTCAACATGC TCGCCAACAT GCGCATGTGT TCGAACGTGC CCGCCCAGTC CGTGGTGCAG
ACCGCGCTTG GCGGCCACCA GAGCGTCAAC GACTACATCG TGCCGGGCGG CCGCGTGCAC
GACCAGCGCG ACCTCGTCTA CGACATGCTC AACCAGATTC CCGGCATCAC CGCCGTCAAG
CCGAAGGCCG CGTTCTACAT CTTCCCGAAG ATCGACGTCA AACGCTTCAA CATCCACTCG
GACGAGCAGT TCGCGCTCGA CCTGCTGCAT GACAAGCACA TCCTCATCAG CCACGGCGGC
GCGTTCAACT GGCATCGCCC CGACCACTTC CGCGTGGTGT ACCTGCCGCG CATGGGCATG
CTGCGCGAAA CCATGGGGGA GATCTCCGAC TTCTTCAGCT ACTACTGGCA GAGCTGA
|
|---|
| Protein sequence | MSVSVFAERL RNAMNSRGLK QVDLVHAAEH RGVKMGKSHI SQYVAGKTMP REDVLEFLAS
ELDVDTNWLR GEESTTQLNS DASNSVTDGE HAATPLAMGA AKPQTDSEIP VGRRRTFGKS
HKLDNVLYDV RGPVADEAMR MEANGTHILK LNIGNPAPFG FRTPDEVVYD MAHQLTDTEG
YSPSKGLFSA RKAIMQYAQL KNIPNVTIDD IYTGNGVSEL INLSMSALLD TGDEVLVPSP
DYPLWTACVN LAGGTAVHYL CDEQSEWYPD IDDIRSKITS NTKAIVIINP NNPTGALYPK
EVLQQIVDIA REHQLIIFSD EIYDRLVMDG LQHISIASMA PDLFCVTFSG LSKSHMIAGY
RIGWMILSGN KRIAKDYIEG LNMLANMRMC SNVPAQSVVQ TALGGHQSVN DYIVPGGRVH
DQRDLVYDML NQIPGITAVK PKAAFYIFPK IDVKRFNIHS DEQFALDLLH DKHILISHGG
AFNWHRPDHF RVVYLPRMGM LRETMGEISD FFSYYWQS
|
|---|
| |