| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0435 |
|---|
| Symbol | |
|---|
| ID | 6363745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 519642 |
|---|
| End bp | 520592 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642679586 |
|---|
| Product | L-2-hydroxyisocaproate/malate/lactate dehydrogenase-like protein |
|---|
| Protein accession | YP_001954379 |
|---|
| Protein GI | 189439298 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0223779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACTA TGAACCGCAA CAAAGTCGTT ATCGTCGGCA CCGGCCGGGT CGGTGCCACC
GCCGCCTTCG GCATCGTCAC GCACGGCCTG TGCAATGAGC TTGTGCTCAT CGACTGTTCC
GCCGCCAAGG CCCTGGGGGA GGCCCGCGAC CTCGATGATG GCAGCGAATT CCAGGACCGC
CACGTCAAGG TGCGCGCCGG CGACTACGCC GACTGCAAGG ATGCGGACAT CGTCGTCATC
ACCGTGGGCC GCAAGCCGCC GGCCAACTCC AACCGCATGG CCGAACTCGG CTTCACCGTG
GGTCTTGTGG GCGAAGTGGT CGACAACGTC ATGGCCTCCG GTTTTGACGG CGTGATCGTC
ATGGTCTCCA ACCCGGTCGA CGTGATGGCT TGGTATGCCT GGAAACGTTC CGGTCTGCCT
CGCACCCAGG TGCTCGGTAC CGGCACCGCG CTCGACACCT CGCGTCTCAA GACCATCATC
GGCGAAGAGA CCGGCCTTGA CCCGCGCAAC GTGGGCGGCT TCGTGATGGG CGAGCACGGC
GACTCCCAGT TCACCGCATG GTCCACCGTC TCGCTCGGCG GCAAGCCATT CGCCCGCTTC
CTGGCCGACA ACCAAGACCG TTTCGCCTCC GTGTCCACCA CCGAAATCGA AGAGAAGACC
CGCACCCGTG GCAATGAGAT CGTCGCGGCC AAGGGCGGCA CCAACTTCGG CATCGCCTCC
ACCGTGGCCG GCATCGTACA GACCATCCTG TGGGACGAAC GCCGCATCGT GCCCGTCTCC
ACCCTGCTGG ACGGCGAATA CGGCGAACAT GACGTGTTCC TCGGCGTCCC CACTGAACTG
CGCGCCAATG GTGCCAACGA GATCGTCGAA CTCGATCTGA GCGAGGACGA GCGGGCCAAA
CTGCACCATT CCGCCGAACT CGTGCGTGAA CACTGTGAGG GGCTGCTGTG A
|
|---|
| Protein sequence | MVTMNRNKVV IVGTGRVGAT AAFGIVTHGL CNELVLIDCS AAKALGEARD LDDGSEFQDR
HVKVRAGDYA DCKDADIVVI TVGRKPPANS NRMAELGFTV GLVGEVVDNV MASGFDGVIV
MVSNPVDVMA WYAWKRSGLP RTQVLGTGTA LDTSRLKTII GEETGLDPRN VGGFVMGEHG
DSQFTAWSTV SLGGKPFARF LADNQDRFAS VSTTEIEEKT RTRGNEIVAA KGGTNFGIAS
TVAGIVQTIL WDERRIVPVS TLLDGEYGEH DVFLGVPTEL RANGANEIVE LDLSEDERAK
LHHSAELVRE HCEGLL
|
|---|
| |