| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0430 |
|---|
| Symbol | |
|---|
| ID | 6363677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 514858 |
|---|
| End bp | 515844 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642679581 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001954374 |
|---|
| Protein GI | 189439293 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1660] Predicted P-loop-containing kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAC AGACAACGAA CCGCGATACC GGCGAGGCGG CCGCCACGAA TGCGCCGGCG
AATTCCGCGA CATCCACATC GACTCCGGAC AACCAGCCGA CCCCGCTTGA TGCCTTCGAA
GTGCTGCTCA TCACCGGTAT GTCCGGCGCA GGCCGCTCTC ATGCCGCTGA CTGCGTGGAA
GACATGGGAT GGTATGTGGT CGACAACCTG CCTCCCAAAC TGCTTATCCC GCTTGTCGAC
ATGATGACCA CCTCCGGTTC CGGATCGGAG TCAGGCGTCC ACAAGCTTGC CGCCGTCATC
GACGTGCGCT CCAGCTATTT CGACGAGCTG GCCGCCGTGC TCGGCCATCT GGATGATCTC
GGCGTCAAAA CCCGTATTCT GTTCCTCGAC GCCAGCAACG AAGTGCTCAT CAAGCGCTAT
GAATCCGTGC GCCGCCCGCA CCCGCTGCAG CACGGCAACC GACTGATCGA CGGCATCCTT
GAGGAACGTC ACCTGCTGGA AGACCTCAAG GAACGAGCCG ACTGGGTCAT CGACACCAGC
TCCCTGAGCA TCCACCAGCT GTCCACCAAA CTCTACGAGG CGATGCTCGG CTCCGGCCCC
ACCACCGTGG CAGTACACAT CTTCAGCTTC GGCTTCAAAT ACGGTATGCC CATCGACGCC
GATTTCGTGG CCGACGTGCG TTTTCTGCCC AACCCGTTCT GGGTGCCCAA CCTGCGCGAG
CTTACCGGGC ACGACAAGCC GGTCGCCGAC TACGTGCTTT CCAGCAAGGG AGCCAAGGAA
TTTCTCGACG CTTATGAGAA AGCTATCGAG ATTGCGTTGG AAGGATACGC CCAGGAAGAC
AAGCACTACG TAACCATCGC CGTCGGCTGC ACCGGTGGTC AGCACCGGTC GGTGGCGATG
AGCGAAGAGC TGGCTCGCCG CTTACGCGCA CATGGGCTCA ACGTAACCGT TTCCGCGAGA
GAACAGCACA AGCGTCACTC ATCGTAA
|
|---|
| Protein sequence | MNQQTTNRDT GEAAATNAPA NSATSTSTPD NQPTPLDAFE VLLITGMSGA GRSHAADCVE
DMGWYVVDNL PPKLLIPLVD MMTTSGSGSE SGVHKLAAVI DVRSSYFDEL AAVLGHLDDL
GVKTRILFLD ASNEVLIKRY ESVRRPHPLQ HGNRLIDGIL EERHLLEDLK ERADWVIDTS
SLSIHQLSTK LYEAMLGSGP TTVAVHIFSF GFKYGMPIDA DFVADVRFLP NPFWVPNLRE
LTGHDKPVAD YVLSSKGAKE FLDAYEKAIE IALEGYAQED KHYVTIAVGC TGGQHRSVAM
SEELARRLRA HGLNVTVSAR EQHKRHSS
|
|---|
| |