| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0415 |
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| Symbol | uup1 |
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| ID | 6364178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 493454 |
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| End bp | 495055 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642679566 |
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| Product | ABC transporter ATPase |
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| Protein accession | YP_001954359 |
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| Protein GI | 189439278 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.238248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTG AGGTGCAGGG ACTTGAAATT CAGATCGGCG CGCGCACGCT GCTTCACCCC
ACCAACTTCC ATGTGGCCAA GGGAGACAAG ATCGGTCTGG TGGGCCGCAA CGGCGCCGGC
AAGACCACGC TGACCCGCGT GATCACCGGC GACATGCTGC CCACCGCCGG CAAGGTGCGC
GTCTCCGGCA AGCTCGGCTA CCTGCCGCAG GACACGCATG CCTCCGATCC CACACAGACC
GCGCTCGACC GCATGATGAG CGCGCGCGAC ATCGCCACCA TCATCAACCG CATCCGCAAG
GCCGAAAAGG ATATGACCGA CCCGGATCCG GACGTGATGA GCAAGGCCAT GACCCGGTAC
GACAAGGCCA TGCAGGACTT CGACAAGGCC GGCGGCTACG CGGCCCAGTC CGAGGCGATT
TCCATGGCCG CCTCGCTCGG CCTGCCGCAG GAGGTCATGG AGCAGCAGCT CGGCACGCTC
TCCGGTGGCC AGCGCCGCCG CATCGAGCTG GCGCGCATCC TGTTCTCCAA TGCCGACACC
CTGATCCTCG ACGAGCCGAC CAACCACTTG GATGCCGATT CCATCGAATG GCTGCGCGGC
TACTTGAAGA AGTACGAGGG CGGCTTCCTG GTCATCTCCC ACTCCACCGA ACTGCTGGAC
GAAGTGGTGA ACAAGGTCTG GCATCTGGAC GCGCAGCTCG GCCAGATCGA CATGTATTCG
CTTGGCTGGA AGGCCTACCT GCACCAGCGC GTGGTGGACG AGGAGCGCCG CCGCCGCGAA
CGCGAAGTGG CCGAGAAGAA GGCCGACCGT CTCATGAAGC AAGGCATTCG ACTGCACGCC
AAGGCCACCA AGGCCGTGGC GGCGCAGAAC ATGATGCGCC GTGCCGAAAA GCTGCTGGAA
AACACCTCCG AGGCGCAGAA GGCCGAGAAG GTGGCGGACA TCCGTTTCCC CGAGCCCGCG
CCCTGCGGCC GCACGCCGAT CATGGCCAAG GATATTTCCA AGGCCTACGG TTCCAACATC
GTGTTCGCCG GCGTGAACCT GGCCATCGAC AAGGGCTCGC GTGTGGTGAT CCTCGGCTAC
AACGGTGCCG GCAAGACCAC CACGCTGCGC CTGCTGGCCC ACATCGAGGA GCCGGACACC
GGTTCCGTGG AATACGGTCA CGGCTGCAAG ATCGGCTACT TCGCGCAGGA GCACGACACC
TTGGATCTGA ACGCCACCGT GTTGGAGAAC CTGCAGCATG TGGCGCCCGA GCTCGATAAC
ACGCAGGCCC GTTCGATTCT CGGCTCGTTC CTGTTCTCCG GTGACGACGC GATGAAACCG
GCTCACGTGC TTTCCGGCGG TGAGAAGACC CGTCTGGCTC TGGCCACGCT GGTCACCTCG
CGAGCCAACG TGCTGCTGCT CGACGAGCCC ACCAACAACC TCGACCCCGC TTCCCGTGAG
GAGATTCTGA AGGCCATTGC CAAGTATGAG GGCGCCATCG TGCTCGTCAC CCACGATGAG
GGCGCCGTCG AGGCGCTCAA CCCCGAGCGC GTGCTCCTCA TGCCCGACGG CGACGAAGAC
CTCTGGAATG ATTCGTATCT CGAACTCGTA GCTGAAGAAT AG
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| Protein sequence | MAIEVQGLEI QIGARTLLHP TNFHVAKGDK IGLVGRNGAG KTTLTRVITG DMLPTAGKVR
VSGKLGYLPQ DTHASDPTQT ALDRMMSARD IATIINRIRK AEKDMTDPDP DVMSKAMTRY
DKAMQDFDKA GGYAAQSEAI SMAASLGLPQ EVMEQQLGTL SGGQRRRIEL ARILFSNADT
LILDEPTNHL DADSIEWLRG YLKKYEGGFL VISHSTELLD EVVNKVWHLD AQLGQIDMYS
LGWKAYLHQR VVDEERRRRE REVAEKKADR LMKQGIRLHA KATKAVAAQN MMRRAEKLLE
NTSEAQKAEK VADIRFPEPA PCGRTPIMAK DISKAYGSNI VFAGVNLAID KGSRVVILGY
NGAGKTTTLR LLAHIEEPDT GSVEYGHGCK IGYFAQEHDT LDLNATVLEN LQHVAPELDN
TQARSILGSF LFSGDDAMKP AHVLSGGEKT RLALATLVTS RANVLLLDEP TNNLDPASRE
EILKAIAKYE GAIVLVTHDE GAVEALNPER VLLMPDGDED LWNDSYLELV AEE
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