| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0333 |
|---|
| Symbol | |
|---|
| ID | 6362726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 412483 |
|---|
| End bp | 413049 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642679481 |
|---|
| Product | putative ATPase |
|---|
| Protein accession | YP_001954277 |
|---|
| Protein GI | 189439196 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0802] Predicted ATPase or kinase |
|---|
| TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.825022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC ACACTATTGC GGCTCCCACC AGCGAGGCCA TGCAGGAGCT CGGCCGCCGC
GTGGCCGGAA TGGTACACGG CGGCGATGTA TTGCTGCTCT CAGGCCCTCT TGGTGCCGGC
AAAACCACAT TCGCCCAAGG CTTCGGGGCG GGGCTGGACA TTACCGAACC CATCGTGTCT
CCTACATTCA CCATTGCCCG CGAACTTGAC GGGCATTTCG CCGACGGCAC TCCGGCTCAT
CTGGTGCATG TGGATGCCTA CCGTCTGGGC GGCTCAGCCT ATGCGCCGGG GCAGGACGCC
ATCGGGCGTT TGTTGGACGA GCTGGAATCG CTGGGATTGG ACGAAGAACT TGAAGACCCC
GGCGAGAACA CGGTGGTGCT TATGGAGTGG GGCGAACAAA TGGCCACCGC CTTGGCTCCA
GAACGACTTG AAATCCATAT CGATCGACCT CTCGATTCCT CCGATGTCGC ATCCGCTGGA
TCAGACGGCG AACTCACCAG CAACGGCACT CGTACCGTCG CATTCGTCCC AGTCGGCAAG
CGATGGGCCG CGTTCGACCT GCAATAA
|
|---|
| Protein sequence | MSEHTIAAPT SEAMQELGRR VAGMVHGGDV LLLSGPLGAG KTTFAQGFGA GLDITEPIVS
PTFTIARELD GHFADGTPAH LVHVDAYRLG GSAYAPGQDA IGRLLDELES LGLDEELEDP
GENTVVLMEW GEQMATALAP ERLEIHIDRP LDSSDVASAG SDGELTSNGT RTVAFVPVGK
RWAAFDLQ
|
|---|
| |