| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0329 |
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| Symbol | comEA |
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| ID | 6362722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 407483 |
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| End bp | 408187 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642679477 |
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| Product | DNA uptake protein |
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| Protein accession | YP_001954273 |
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| Protein GI | 189439192 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCCAAC CGCGAGTGGA ACGGCCCACG ACGCCTCCGC CGCCTCCCGG CCATGCACGG
ATCCGTCCGG CCGGCCACCC GCCCCAAAGG GCGCAGAGCG GCCTGCGGCA GGCGACTCGT
GACAAACGTG CGTTATCGGA TCTGATTGGC GTACGTTCCG CCGATGCCGT CGGCGAATCA
GCCAGACTCA CCCGGGATCA GCCGCGATTG TCGTTCACCA TTGGGCATGC CTTGGCCGTG
ATATTGCTGC TGATCGTCGC CCTTGGCATC AGCTTGGCAT TGCTGGTCCA ACAGTCGATG
AATATGGCCA TGCTGTCTCA ACCGACCGCC ATGCAGACCA CGGGCGGCTC CGCTGGAGAT
CAGACGATGC CATCGCAGAA CACCACGGAC GAGAAACGCA CGGATCCGCA GCAGTCGGAG
CATTCCGATG CCACAGCGAA CCCCGAATCG GATACCACGC AATCTCCGCA CATGCAGACG
GACGGCAGCG ATGCCGGCGC TTCCACGCAT GGTCTCATCA ACCTCAACAC GGCTACCGCT
GAGGAATTGC AATCCATCAA AGGTATTGGG CCGGTTACCG CTCAGCGGAT CATTGATCAT
CGCACGGCGA TTGGCGGGTA TACATCAGTC GATCAGCTGC TGGATGTCAA AGGCATCGGC
TCCAAGACGT TGGAGACCAT GCGAGGGCAG GTGACGGTCG GATGA
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| Protein sequence | MPQPRVERPT TPPPPPGHAR IRPAGHPPQR AQSGLRQATR DKRALSDLIG VRSADAVGES
ARLTRDQPRL SFTIGHALAV ILLLIVALGI SLALLVQQSM NMAMLSQPTA MQTTGGSAGD
QTMPSQNTTD EKRTDPQQSE HSDATANPES DTTQSPHMQT DGSDAGASTH GLINLNTATA
EELQSIKGIG PVTAQRIIDH RTAIGGYTSV DQLLDVKGIG SKTLETMRGQ VTVG
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