| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0308 |
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| Symbol | spoT |
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| ID | 6363185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 386573 |
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| End bp | 388897 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642679456 |
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| Product | Guanosine polyphosphate pyrophosphohydrolase/synthetase |
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| Protein accession | YP_001954252 |
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| Protein GI | 189439171 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00325244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAGA TTGATGGCGA GCAGTACGCC GCCCGTAAGT TGGGTTGTGA GATCAGTGCC
GATCCGCTCA ATCCGCTGGA TCCAATCAAG AAGGTGTGCA AGTCCCATCA CCCCGATGAG
GATTTGTCCA TTCTTGACCG TGCCTACCGG CGTGCTGTCA TCCAGCACTC CGCCCAGCGC
CGCAAGTCTG GCGAGCCGTA CATCATCCAC CCGCTGGCCG TTTCCCAGAT TCTCGCGGAT
CTGGGCATGG GCCCGATCGT GGTGGCAGCC GGCCTGTTGC ACGACACGGT GGAAGACACC
GACTATACGT TGGATCAATG CCGCGCCGAA TTCGGCGACA CCGTGGCCGG TCTGGTCGAT
GGCGTTACCA AGCTGAGTCA GCTTGAAGTG GGTGATTCCG CCCAAGCCGA AACCATTCGC
AAACTCGTGG TGGCCATGAG CCGCGACGTG CGTACCTTGG TGGTCAAGCT CGCCGACCGC
GTACACAACG CTCGCACCTG GCGCTATGTG AAGACCACGT CCGCCCAGAA GAAGGCGCGT
GAAACCCTTG ACGTGTACGC ACCTTTGGCC AACCGACTCG GTATGAACGC CATCAAGACG
GAGCTCGAGG AACTGAGCTT CAAGGTGCTC TACCCGAAGA TCTACAACGA GATCGTGGTG
CTGGTGGCTC GCCGAGCCGG CCAGCGCGAT GTGTACCTGA AGCAGATTCT GGCGGAGATC
AACGAGGATC TCGACGAGCA GAACATCAAG GCATACGTCA CCGGACGCCC GAAGGATTAC
TTCTCCATCT ACCAGAAGAT GATCGTGCGC GGCCATGATT TCGCGAACAT CTACGATTTG
GTCGGTGTGC GCATCATCGT CGACACCATT CAGGACTGCT ATGCGGCGCT TGGTGCCGTG
CATGCGCGGT GGAACCCGGT TCCCGGCCGA TTCAAGGACT ACATCGCCAT GCCGAAGCTC
AACATGTACC AGTCGCTGCA CACCACGGTG GTGGGCCCCG GTGGCAAGCC GGTCGAAATC
CAGATTCGCA CTTGGGACAT GCACCGCCGC GCCGAATTCG GCATCGCCGC GCACTGGAAA
TACAAGGAAA ACGGCCAGGC CGGCCGCGCC CTGAGCTCGC CGGACAAGTC CGATCGAAAG
CGTGATGAAA ACAATCAGGA GCTTTCCGAG GTCGATAACC TCAAATGGAT TCAGCAGCTC
GCCGACTGGA CCAGCGAAAC CCCTGATTCC AACGAATTCT TGGGCTCGCT CAAGGAAGAC
CTTGGCTCGT CCGAAGTCTA CGTGTTCACG CCGAAAGGCA AAATCGTATC CCTGCCCGCT
CACGCCACGC CGGTCGACTT CGCGTACGCC GTGCACACCG AAGTGGGCCA CCGTACGATG
GGCGCGCGCG TCAACGGTCG TTTGGTGCCG CTCGACACCA CGCTCGATAA TGGCGATACC
GTCGAAATTC TGACGTCCAA ATCCGATACA GCCGGCCCGT CACGCGATTG GCTGAGCTTC
GTCAAGAGCC CGAAGGCCCG CAACAAGATT CGTCAGTGGT TCTCCAAGGA GCGTCGTACT
GAAGCCATCG AGGAGGGCCG CGACGAGCTG ACCCGCGCGA TGCGCAAGCG CAATCTGCCG
GTCAACACAT TGCTTACGCC CGAAGCACTG GTGGGTGTGG CCGACGACCT TAACTTCCCG
AACGCGGACG CCGTGTTCGC CGCCATTGGT GACGGACAGG TCTCCACGCA GAACGTCATC
TCGCATCTGG TCAAGGATGC GGGTGCCGAC GAGGTCGATG AGGAAGTCGA GCAGGAAGTC
CTGCCGCTGA AGCCCATGGA ACGCAAGGCC TCCAGCAGCT CCACCGGCGT GTCCGTCAAG
GGCGTGGGCG ATGTGTGGAT CAAGCTGGCC CGTTGCTGCA TGCCGGTGCC CGGTGACAAT
ATCATCGGCT TCATCACCCG TAATCAGGGC GTATCCGTGC ACCGCACCGA CTGCCAGAAC
ATGATCGATC TGAAAAACAA GCAGCCTGAG CGTGTGGTCG AAGTCGAATG GACCAGCACC
AAGGGCCTGT TCATGGTCAA GATTCAGGTC GAGGCGCTGG ATCGACGAAA CCTGCTTTCG
GACGTGACAC GTGTGCTTTC CGACCATGGC GTGAACATCA TTTCCGGTAC GATCGCCACC
GGTTCCGATC GCGTGGCCAC CAGCCAGTTC AGCTTCGAAA TGGCCGATCC GCAGCATCTC
AACTCGTTGC TGGCAGCCGT GCGCAAGATT GATGGCGTGT TCGACGTGTA CCGCATCACT
GGTGCCAAGG AATCCGCCGA ACCTCGACTG CGCAAGATGA AGTAG
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| Protein sequence | MAEIDGEQYA ARKLGCEISA DPLNPLDPIK KVCKSHHPDE DLSILDRAYR RAVIQHSAQR
RKSGEPYIIH PLAVSQILAD LGMGPIVVAA GLLHDTVEDT DYTLDQCRAE FGDTVAGLVD
GVTKLSQLEV GDSAQAETIR KLVVAMSRDV RTLVVKLADR VHNARTWRYV KTTSAQKKAR
ETLDVYAPLA NRLGMNAIKT ELEELSFKVL YPKIYNEIVV LVARRAGQRD VYLKQILAEI
NEDLDEQNIK AYVTGRPKDY FSIYQKMIVR GHDFANIYDL VGVRIIVDTI QDCYAALGAV
HARWNPVPGR FKDYIAMPKL NMYQSLHTTV VGPGGKPVEI QIRTWDMHRR AEFGIAAHWK
YKENGQAGRA LSSPDKSDRK RDENNQELSE VDNLKWIQQL ADWTSETPDS NEFLGSLKED
LGSSEVYVFT PKGKIVSLPA HATPVDFAYA VHTEVGHRTM GARVNGRLVP LDTTLDNGDT
VEILTSKSDT AGPSRDWLSF VKSPKARNKI RQWFSKERRT EAIEEGRDEL TRAMRKRNLP
VNTLLTPEAL VGVADDLNFP NADAVFAAIG DGQVSTQNVI SHLVKDAGAD EVDEEVEQEV
LPLKPMERKA SSSSTGVSVK GVGDVWIKLA RCCMPVPGDN IIGFITRNQG VSVHRTDCQN
MIDLKNKQPE RVVEVEWTST KGLFMVKIQV EALDRRNLLS DVTRVLSDHG VNIISGTIAT
GSDRVATSQF SFEMADPQHL NSLLAAVRKI DGVFDVYRIT GAKESAEPRL RKMK
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