| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0301 |
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| Symbol | lhr |
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| ID | 6363388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 374485 |
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| End bp | 379218 |
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| Gene Length | 4734 bp |
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| Protein Length | 1577 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642679449 |
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| Product | Lhr-like helicase |
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| Protein accession | YP_001954245 |
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| Protein GI | 189439164 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.610985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGAAA GCCTGAGCCT GTTTTCCGAA CCCACCAAGA TGTGGTTCGA GCATGCCTTC
GGTCAGCCGA CCGAGGCACA GGCTCAGGCA TGGCCGGCAA TCCATTCCGG TCGCAATGTC
TTGGTCATCG CCCCTACCGG TTCCGGTAAA ACATTGGCCG CGTTTCTCTC AGCCATCGAC
CGATTGATGA CCGTGCCACG CACGCGGCGT GCCGGTGTGC GTGTGCTGTA TATCTCGCCG
TTAAAGGCGC TCGCGGCCGA TGTGGCCAAG AACCTAGAAC AGCCTTTGGA GGGCATTGCT
GCACAATGCG AGGCGCAAGG GCTGCCCGTG CCGAAGATCG CGGTCGCCAC TCGTTCAGGC
GACACCACCG CACAGGAGCG GCGACGCATA GCCTCCCATC CACCGGATAT CCTCGTTACC
ACGCCAGAAT CGTTGTATTT GTTGCTCACT TCGAAGGCAG GGCGGATTCT CGGCACTGTC
GATACGGTGA TCGTCGATGA GATTCATGCA GTGGCGGGCA CCAAGCGCGG CGCACATTTG
GCGGTAAGTC TGGAACGGCT GGAGAACCTT GTCACAGAAT CGCGCAAGCG AGATGCAATC
GATGCAGATG CTGATGAGGG CGGTGATGCC GCCGTCGATG CTGGCCGTGG CGATCGTCAT
ATGCAGCGCA TTGGTCTATC CGCTACGGTG AATCCGCCTG AAAAGGCGGC GCGATTCCTG
GGCGGCGGGC AACCGGTTAC CATCGTGAAT CCCGGTGGGC GGCCTGCAAT GGATTTGCGC
ATGATTGAGC CGTTGGAAAA CATGCGTGAT TTGCAGTCCG TGAATGCCAA GCAGCGTGTC
GGTGGCGTGG ATGCTGAACG GTCCGCTCCG CATATCAGTG GTGTCACGCC GGCCATGCAG
CGACTTGCTG AACGCAGGGG CATTGTGCCG GTGGATGATA GAGATGTTTC TTCCACTTCT
GGGGACGATT CTGATGCGAG TGATGCGTTC GATTCCTCCG CGTTGGTTGG AGCGGCGGGC
GACCGTACCT CCGGTTCCAT TTGGCCCGTG GTGGAACGCA GTATTTTGGA TGAGATTCTC
GCGCACCGCA CTACATTGGT GTTCGTTAAT TCGCGTGGTG TGGCTGAGAA ACTCACTGCG
CGCTTGAACG ATCTGTATGC GCAGACCCGG CATGGCACCA ATCCCGACAC TGTGCGGGAT
CTGGGCTCTC CGGAAGGCCG CGAAGGGTTC TCCACGCATT ACGATGCTGT GGTCGGCTCC
ACCACCATGC TTGTCGGCTC ACATGAGGGC GATGATGTCA TCGCCATGGC TCATCATGGG
TCGGTTTCCA AAGACCGTCG CAAAATGATT GAGGAACGGC TTAAACGTGG TGAATTGCGT
TGCGTGGTGG CCACCTCCAG TTTGGAGCTC GGCATTGATA TGGGCTCGGT CGACTTGGTG
ATTCAAGTCG ATACGCCGTT GTCGGTCTCC TCCGGATTGC AGCGTGTAGG CCGTGCCGAT
CATCAGGTCG GTGGCGTCTC TCACGCATTG TTCTACCCGC TCACCCGTCA GCAGATTGTC
ACTGGGGCCG CAAGTCTGGA AGCCATGATT GCCGGCGATA TAGAACCATT GGCCGTGCCG
CGCAATCCGC TCGATATTCT TGCCCAGCAG ACCGTGGCCG CTGCCGCGAT GCACGATTTG
AACGCTGATG ACTGGTATGC CACAGTGCGT CGTGCTGCGC CGTTTGCCGA ACTGCCACGT
GACATGTTCG ATGCGGTAAT CGGCATGATG TCCGGCGAAT ACAACAGCGA GGAATTCTCG
GCCTTCCGGC CGCGACTGGT ATGGAATCGG GATAATGGCC TGATTTCCGC CCGTCCCGGT
TCGCAGAAAG TGGCCGTTAC CTCTGGCGGT ACGATTCCCG ATCGAGGGCT GTACACCGTG
GTCCTGCCTG AGGCGGACGC CGGCAAAGGC CAGCGTCGCG TCGGCGAGTT GGATGAGGAG
ATGGTCTACG AATCGCGCGT GGGCGATGTC ATTACGCTCG GCACCTCCAC ATGGCAGATT
CAGGAAATCA CCCGTGATCG TGTGGTCGTG ACTCCGGCTC CGGGCCGCAC CGCCCGCCTG
CCGTTCTGGC ACGGTGAAGG CGCTGGCCGT GACTACGGTT TCAGCCGTAC CATAGCCCGC
TTCACCCGAG AAATCGCCGC CGGATTAGAC GTGAAGCGGA CTGAGGGGAG GTCTGCCGCA
GAAGGTCCAG CTGTCCCAAC CTTCATCCCA ACAATCCTCA CCCGTCTCCA CCACGATGGC
CTAGATGCCA ACGCCATCAC CAACTTGGCC CGCCTACTCT CCGAGCAACA AGCCGCCACT
GGTGCAGTCC CCAGCGACCA AACCCTTATC GTGGAGCGCA CACGCGATGA AGACGGCGGA
TGGCGCATCG TGCTGTTAAG CCCCTTCGGC CGCCGCGTTC ACGAACCGTG GTCCATGGCC
ATCAGCCGCA GACTGCGCCA ACGCTACGGT TTCGACGGGC AGGTATATGC CGCCGATGAC
GGTATCGTCA TTCAGCTACC GGACGGTGAC GGACATATTC CTGCTCAAGA CCTGTTCCTT
TTCGACCCAG AAGACCTCAA AGCAGATGTA GAGCGTCAAG TGGGCGAGTC CGTGCTATTT
GCCGCACGAT TCCGCGAATG CGCCGCCCGA TCACTGTTCA TGCCTCGTTC CGATCCAGGC
CGTCGCGTAC CCCTATGGCA GCAGCGACTG CGCGCCGCAC AGCTCCTGCA ATCCGCACGT
ATGGCCAAGA ACTTTCCGCT GCTGCTGGAA ACCGCGCGCG AATGTTTGCA AGACGTATAC
GACATGCCCG CCCTGAACGA GGTGATGACC GGATTGCAAG CCGGCACCAT TACCGTGAAG
GACGTGGAAA CCGAGTCGCC ATCGCCTTTC GCCGAGAACA TTCTCTTTGG CTTCGTCGGC
GTGGTGATGT ACCAGTATGA CCAACCTCAG GCCGAGCGTA GCGCGCAACT GCTGTCTCTC
GATCCGCACG TGCTCGAACG CTTGCTCGGC GCCACCGATA TGGCACAAGT GCTCAACCCG
GACGTGATTC GCGAAGTCGA ACAGGAACTG GGGGAGCACA CTTTCTGGAA TGAGCTTGCC
GACGATGATG TGACTGGTCG CGTGACCCGT TACGCCAAAA CCCATGGTCC TTTCACCGCC
GATCAGCTCA TAGCCGATCT ACACCTCGAT GCTACGGATG CCGTGCACAC TCTGGATGTG
CTGGCTGCCA AAGGCGAGTT GCTGCAAGGC CACTTTGTAG ATGATGACGA GCAAGGCCAA
CAGTGGCTCC ATAAGGACGT ATTCCGCCGT ATTCGGTCTC GCTCATTGGC CAAGGCGCGT
AAAGCAGTCA AGCCAGTAGA ATCAGAGGCG TTCCAGATGT TTCTTATCGA CCGACAAGGT
ATCGGGCCGG TCGGCGGCGA ACGATATGAA GGTGCTGACG GGCTCATGCG CGTTATCGAG
CAGCTGGAGG GCATATCACT GCCCACTGCA CTCTGGGAGT CGGCAGTATT CCCCGCACGA
GTACGAGACT ACCAACCTGC ATTGCTGGAT GAGTTGCTGA CCAGCGGCGA TGTGGTCTGG
GTCGGCTCAA AAACCGGGGG AACCAGTGCG ATGGACCCCG GTGAGGTTGC TTTCTATCCG
GCGGATTCAA TATTGTTCAG CGGTGTGGAA CATGGTACGA CATCGAACGC CTCAGACGCC
ACCATGCCGG AAGCGATTCT GACCGCACTG GACTCAGGGG GAGCGTTCCA TGCCCGTCAA
CTGATGGATG CCGCCAAACG TGCGTGGAAT GAGACCGCGG AGCCGGACAT CAATCCAAAC
ACCGGCGAAA TCATTCCGCA AGAGTGGAGC GAACAGCAGT TCAAGGATGC CTTGTGGAGC
TTGGTCTGGC AAGGTAAGGT CACCAATTCC AGCTTCGCGC CGGTGCGTGC ATTAACCGCA
GGCGCAGCAA GCCCGCGTAA ATCCACTACA TCACGTCGTC GTGGGCGTGT CGCTCCGATT
CGCCGAGCCA CTACGGATAT GACGTTAGGA GGTTTGTGGT CCGCCGTAAT CGGGCAAGCT
GAAGCCGAAG ACACCGACCA GACCGAACGG GCACTCGCAC TGGTCGAGAC GTTGCTGGAC
AGGTATGGCG TCATCGCGCA GCCGGTGATT GACAAGGAAA ATATCCCGGG TGGCTACTCA
GCGTTGTATC CGGTATTGAA TCGCATGGAG GAGCATGGTC GACTGGTACG AGGCATGTTC
GTCCGTGGTT TCGGCGCGGC CCAATTTGCC GAGCGCGACA CCGTGGATGC GTTGCGTCAT
CCGTCAGAGC ATCGCGGCCA GTCCGTGGTG GCATTGAGTG TGCTCGACCC CGCAAATCTC
AGTGGCTCCG CCATCGCGTG GCCGGACGCG CCTGCCGGTG CGGGTAAACC GGCACGCCGT
ATCGGAGCCA CGGTCGTGCT CAATGCGCAA GGCGCGCTAC TATACGCGGC CGCCAAAGCC
AAGCACCTGA CAGCGTTCGA TCAATCGGTC GGCCATGAAG CCGCTGTCAA TGATTCCGAC
GAACAAATGC GCAAGGCCGC CACAGAACTG GCCTACGCCC TCAAACGCAA TGGCACCGGC
TCCGTGACAT TCAGCGACAT CAATGGCGAA CCCCTCAACG CCCGTCACCC CTTCGCCCGC
ATCCTCCACC AGTCCGGCTT CACCCCCGTT CCCCAAGGCA TGCGGCTGTA CTGA
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| Protein sequence | MYESLSLFSE PTKMWFEHAF GQPTEAQAQA WPAIHSGRNV LVIAPTGSGK TLAAFLSAID
RLMTVPRTRR AGVRVLYISP LKALAADVAK NLEQPLEGIA AQCEAQGLPV PKIAVATRSG
DTTAQERRRI ASHPPDILVT TPESLYLLLT SKAGRILGTV DTVIVDEIHA VAGTKRGAHL
AVSLERLENL VTESRKRDAI DADADEGGDA AVDAGRGDRH MQRIGLSATV NPPEKAARFL
GGGQPVTIVN PGGRPAMDLR MIEPLENMRD LQSVNAKQRV GGVDAERSAP HISGVTPAMQ
RLAERRGIVP VDDRDVSSTS GDDSDASDAF DSSALVGAAG DRTSGSIWPV VERSILDEIL
AHRTTLVFVN SRGVAEKLTA RLNDLYAQTR HGTNPDTVRD LGSPEGREGF STHYDAVVGS
TTMLVGSHEG DDVIAMAHHG SVSKDRRKMI EERLKRGELR CVVATSSLEL GIDMGSVDLV
IQVDTPLSVS SGLQRVGRAD HQVGGVSHAL FYPLTRQQIV TGAASLEAMI AGDIEPLAVP
RNPLDILAQQ TVAAAAMHDL NADDWYATVR RAAPFAELPR DMFDAVIGMM SGEYNSEEFS
AFRPRLVWNR DNGLISARPG SQKVAVTSGG TIPDRGLYTV VLPEADAGKG QRRVGELDEE
MVYESRVGDV ITLGTSTWQI QEITRDRVVV TPAPGRTARL PFWHGEGAGR DYGFSRTIAR
FTREIAAGLD VKRTEGRSAA EGPAVPTFIP TILTRLHHDG LDANAITNLA RLLSEQQAAT
GAVPSDQTLI VERTRDEDGG WRIVLLSPFG RRVHEPWSMA ISRRLRQRYG FDGQVYAADD
GIVIQLPDGD GHIPAQDLFL FDPEDLKADV ERQVGESVLF AARFRECAAR SLFMPRSDPG
RRVPLWQQRL RAAQLLQSAR MAKNFPLLLE TARECLQDVY DMPALNEVMT GLQAGTITVK
DVETESPSPF AENILFGFVG VVMYQYDQPQ AERSAQLLSL DPHVLERLLG ATDMAQVLNP
DVIREVEQEL GEHTFWNELA DDDVTGRVTR YAKTHGPFTA DQLIADLHLD ATDAVHTLDV
LAAKGELLQG HFVDDDEQGQ QWLHKDVFRR IRSRSLAKAR KAVKPVESEA FQMFLIDRQG
IGPVGGERYE GADGLMRVIE QLEGISLPTA LWESAVFPAR VRDYQPALLD ELLTSGDVVW
VGSKTGGTSA MDPGEVAFYP ADSILFSGVE HGTTSNASDA TMPEAILTAL DSGGAFHARQ
LMDAAKRAWN ETAEPDINPN TGEIIPQEWS EQQFKDALWS LVWQGKVTNS SFAPVRALTA
GAASPRKSTT SRRRGRVAPI RRATTDMTLG GLWSAVIGQA EAEDTDQTER ALALVETLLD
RYGVIAQPVI DKENIPGGYS ALYPVLNRME EHGRLVRGMF VRGFGAAQFA ERDTVDALRH
PSEHRGQSVV ALSVLDPANL SGSAIAWPDA PAGAGKPARR IGATVVLNAQ GALLYAAAKA
KHLTAFDQSV GHEAAVNDSD EQMRKAATEL AYALKRNGTG SVTFSDINGE PLNARHPFAR
ILHQSGFTPV PQGMRLY
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