| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0295 |
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| Symbol | ispA |
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| ID | 6363826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 365935 |
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| End bp | 367017 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642679443 |
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| Product | geranylgeranyl pyrophosphate synthase |
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| Protein accession | YP_001954239 |
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| Protein GI | 189439158 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0106667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCACAA CTGCTAACAA CCGCGAAATC ATCGAGCCAC GCATCATTCA GTTGGTGCGG
GAACTGACTG CCGCCCCCGC CACCGACGAG GTTGCCGACG CCCTGAAACC GGTGATGGAA
CAGGTTGTGG ACCAAGCCGC CTCCTCCAGC CAAGGAGGCA AACGACTGCG TGCGCTGCTC
GCGTTGGACG CCTTCGATAT TCTTGCCGGC GACGTGACGC CTGATCGGCG TGACGCCATG
ATCGACCTGG CCTGCGCCAT TGAAGTGTTT CAGACGGCCG CACTGGTGCA TGACGACATC
ATCGACGAAT CCGATCTGCG CCGGGGCAGG CCTTCCGCAC ATCGTGCCTT GGAACAGGCC
GTACACAGCG GTGCCATAGG CCGTGGCTTG GGCCTGATGC TCGGCGACAT TCTGGCCACC
GCCTGCATTG AAATCACACG CCGGTCCGCC AGCCGTCTTC CCAACACCGA TGCCCTGAAC
GAGGCGTTTC TTACCATGCA ACGCGAGGTG GAAATCGGCC AGGTACTGGA CTTGGCCGTC
GAGATGACCC CACTGTCCAA TCCCGAAGCT CTGGCGAACG CCTCATTGAA CGTATTCCGC
TGGAAGACAG CCAGTTACAC CACCATCGCT CCACTGCTGC TTGCACTGCT GGCCGCAGGA
GAGAGCCCGG ATCAGGCCAG GCATTGCGCG TTGGCCGTCG GCCGGCCGCT CGGACTGGCG
TTCCAACTGG CGGATGACCT GTTGGATGTC GTCGGATCAA GCCGCAATAC CGGAAAACCA
GTTGGCGGAG ACATCCGAGA AGGCAAACGC ACAGTGCTGT TGGCTGATGC TCTGTCTGCG
GCAGATACGG CGGATAAGGC CGATCTGATT GCCATCTTCG AAGAAGATTG TCGCAATGAC
AACCAGGTGG CCCGCACCAT TGAACTGTTC ACGTCGACCG GTGCTCTTGA TCGATCCCGC
GAGCGCATCG CTGCCCTATG GGGTGAGTCC CGTAAGGCGA TTGCCGGTCT TGAGCTGAAT
TCCGAAGCGC AACGCCGTCT GACCGAGGCT TGTGCGCGAT TCGTCCCCGA ATCCTTGCGA
TAG
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| Protein sequence | MCTTANNREI IEPRIIQLVR ELTAAPATDE VADALKPVME QVVDQAASSS QGGKRLRALL
ALDAFDILAG DVTPDRRDAM IDLACAIEVF QTAALVHDDI IDESDLRRGR PSAHRALEQA
VHSGAIGRGL GLMLGDILAT ACIEITRRSA SRLPNTDALN EAFLTMQREV EIGQVLDLAV
EMTPLSNPEA LANASLNVFR WKTASYTTIA PLLLALLAAG ESPDQARHCA LAVGRPLGLA
FQLADDLLDV VGSSRNTGKP VGGDIREGKR TVLLADALSA ADTADKADLI AIFEEDCRND
NQVARTIELF TSTGALDRSR ERIAALWGES RKAIAGLELN SEAQRRLTEA CARFVPESLR
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