| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0287 |
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| Symbol | secA |
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| ID | 6364095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 356423 |
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| End bp | 359317 |
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| Gene Length | 2895 bp |
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| Protein Length | 964 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642679435 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001954231 |
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| Protein GI | 189439150 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.196625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCGATA TTATTGACAA AGCCCTGCGA ATGGGTGAAG GCCACCAGCT CAAGAAGCTG
GAGAACGTGG CCAAGGCCGT GAACGCTCTT GAGGACGAGA TCTCCGCCCT CTCTGACGAG
GATCTGAAGG CCCAAACCCC GAAGTTCAAG CAGGAAATCG AAAACGGCAA GAGCCTGGAC
GAGATCATGC CCGAGGCGTT CGCCACCGTG CGCGAGGTCT CCAAGCGCAC CCTTGGCCAG
CGTCACTTCG ACGTGCAGCT CATGGGCGGT GCTGCCCTGC ACTGGGGCAA CATCGCCGAA
ATGAAGACCG GTGAAGGCAA GACCCTGGTC GCCACCCTGC CCACCTATCT GAACGCTCTC
GAAGGCAAGG GCGTGCACGT GGTCACCGTC AACGACTACC TCGCCAGCTA CCAGAGCGAG
CTGATGGGCC GTATCTACCG TTTCCTCGGC ATGAACGTCG GCTGCATCAT CACCGAGCAG
AAGCCGCCGG AGCGCCGCAA GCAGTACAAC GCTGACATCA CCTACGGCAC CAACAACGAG
TTCGGCTTCG ACTACCTGCG TGACAACATG GCATGGGAGA AGGCCGACCT CGTGCAGCGC
GGTCACCACT ACGCCATCGT CGATGAGGTC GATTCCATCC TCATCGATGA GGCCCGTACC
CCGCTTATCA TCTCCGGCCC GGCCGAAGGC GACGTGACCC GCTGGTACCG TCAGTTCGCC
AAGCTGGTGC TGAAGCTCAC CCGCGACGAG GACTACGACG TCGACGAGAA GAAGAAGGTC
GTCGGCATCC TGGACCCGGG CATCACCAAG GTCGAGGACT TCCTCGGCAT CGACAACCTG
TATGAGCCGG CCAACACCGC CCTGATCGGC TACCTCAACA ACGCCATCAA GGCCAAGGAA
CTGTTCCTGC GTGACAAGGA CTACGTCGTC ACCCAGGGCG AGGTGCTCAT CGTCGACGAG
CACACCGGCC GTATCCTGCC GGGCCGCCGC TACAACGAGG GTCTGCACCA GGCCATCGAG
GCCAAGGAAG GCGTGGAGGT CAAGGCCGAG AACCAGACCT TCGCCACCAT CACCCTGCAG
AACTACTTCC GTATGTACGA CAAGCTCGCG GGCATGACCG GTACGGCCGA AACCGAGGCC
GCCGAGTTCA TGAACACCTA CAAGCTGGGC GTGCTGCCGA TCAAGACCAA CAAGCCGATG
ATCCGCAAGG ACCAGGACGA CCTCATCTAC CGCACCAAGA AGGAGAAGCT GGCCGCCATC
GTCAAGGACG TGGCCAAGCG TCACGCCAAG GGCCAGCCGG TGCTGCTCGG TACCGCTTCC
GTGGAAAGCT CCGAAGTGGT CTCCACCCTG CTCGACGTGG CCAAGATCCC TCACCAGGTC
CTGAACGCCA AGCAGCATGA GAAGGAAGCC GCCGTGGTCG CCGTCGCCGG CCGCAAGGGA
GCCGTCACCG TGGCCACCAA CATGGCCGGC CGTGGTACCG ACATCATGCT CGGCGGTAAC
GTCGAGTTCC TTGCCGACGC CAAGCTGAAG TCCGAGGGCT ACTCTCCGGA GGACACCCCG
GAAGAGTATG AGAAGCGTTG GCCGGGCACC CTGAACGAGA TCAAGGCCCA GGTCAAGGAC
GAGCATGAGG AGGTCAAGGA GCTGGGCGGC CTGTACGTGC TCGGCACCGA GCGCCACGAG
TCCCGTCGAA TCGACAACCA GCTGCGCGGT CGTTCCGGCC GTCAGGGCGA TCCAGGCGAG
TCCCGCTTCT ACCTGTCGCT GGAAGACGAT CTGATGCGTC TGTTCAACAC CCAGCTGGTG
GCCCAGGTCA TGGCCAAGGG CATGGAGGAA GGCCAGCCGA TCGAGGCCAA GTCCGTGACC
AAGGGCGTGC GCACCGCACA GAAGGCCGTC GAATCCCGCA ACTACGAGAT TCGTAAGAAC
GTGCTGAAGT ACGACGACGT GATGAACAAG CAGCGTACCG TCATCTACTC CGAGCGTCAG
GCCGTGCTCA AGGGCGAAGA CATCCACAAG GACATCCTGC GTTTCATTTC CGACACCGTC
GAGTCCTACA TCAAGGGTGC CAACAAGGGA TCCGAGAAAC CGAAGGACTG GGATTGGGAG
GGCCTGTTCA AGGCGCTCAA CACCGTGATC CCCACCAAGG TCGACGAAGA CGAGGTCAGG
AAGATCGTCG GCGGCCTCAA GGGTGCGAAG GCCGTCGAGG CCGTGCGCGA CCTGATCGTC
GAGGACGCCA GGCAGCAGTA CGGCGAAATG GAGGAGACCA TCGGCGAGAC CGGCTTGCGT
GATCTCGAAC GCCGCGTGGT GCTCGCCGTG CTCGACCGCA AGTGGCGCGA GCACCTTTAC
GAGATGGATT ACCTCAAGGA CGGCATCGGC CTGCGTGGCA TGGGCCAGCG CGACCCGCTG
GTCGAATACC AGCGCGAAGG CTACCAGATG TACAACTCCA TGATCGAGGC CATTAAGGAG
GAGACCGTCC AGCTGCTGTT CCACATCGAC ATCAAGCAGG TCGCCACCAC CGACGAGGCC
GTTGACGAGG TCGAGGAGAC CGCCGAAAGC GCCGACACCA TCGCCGTGGC CTCCGGCCCC
GACGAGAACG GCGAATCCGT GGTCGAGGCC GCCGAGGGCG AAGTCGAGGA AGAGGACGAG
GATACGGACG CCAAGCAGGC GATCGCCGAA TCCGCAGCCG CCTCCGGGGC CGGCGAGTCC
ACGCTGCCTG TTGCCGGACC GGCTCCGATC AGCCACGCCG AAGGCAAGGT CCCGGTTTCC
AAGCGTCCGA AGAGCGAAGA GCTCAAGACG CCGTGGGCCG ACGGCCGCAC CTTCCCTGGC
ACTGGCAAGA ACGCCCCGTG CCCGTGCGGT TCCGGCCGCA AGTACAAGAT GTGCCACGGC
CAGAACGAGA AGTGA
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| Protein sequence | MVDIIDKALR MGEGHQLKKL ENVAKAVNAL EDEISALSDE DLKAQTPKFK QEIENGKSLD
EIMPEAFATV REVSKRTLGQ RHFDVQLMGG AALHWGNIAE MKTGEGKTLV ATLPTYLNAL
EGKGVHVVTV NDYLASYQSE LMGRIYRFLG MNVGCIITEQ KPPERRKQYN ADITYGTNNE
FGFDYLRDNM AWEKADLVQR GHHYAIVDEV DSILIDEART PLIISGPAEG DVTRWYRQFA
KLVLKLTRDE DYDVDEKKKV VGILDPGITK VEDFLGIDNL YEPANTALIG YLNNAIKAKE
LFLRDKDYVV TQGEVLIVDE HTGRILPGRR YNEGLHQAIE AKEGVEVKAE NQTFATITLQ
NYFRMYDKLA GMTGTAETEA AEFMNTYKLG VLPIKTNKPM IRKDQDDLIY RTKKEKLAAI
VKDVAKRHAK GQPVLLGTAS VESSEVVSTL LDVAKIPHQV LNAKQHEKEA AVVAVAGRKG
AVTVATNMAG RGTDIMLGGN VEFLADAKLK SEGYSPEDTP EEYEKRWPGT LNEIKAQVKD
EHEEVKELGG LYVLGTERHE SRRIDNQLRG RSGRQGDPGE SRFYLSLEDD LMRLFNTQLV
AQVMAKGMEE GQPIEAKSVT KGVRTAQKAV ESRNYEIRKN VLKYDDVMNK QRTVIYSERQ
AVLKGEDIHK DILRFISDTV ESYIKGANKG SEKPKDWDWE GLFKALNTVI PTKVDEDEVR
KIVGGLKGAK AVEAVRDLIV EDARQQYGEM EETIGETGLR DLERRVVLAV LDRKWREHLY
EMDYLKDGIG LRGMGQRDPL VEYQREGYQM YNSMIEAIKE ETVQLLFHID IKQVATTDEA
VDEVEETAES ADTIAVASGP DENGESVVEA AEGEVEEEDE DTDAKQAIAE SAAASGAGES
TLPVAGPAPI SHAEGKVPVS KRPKSEELKT PWADGRTFPG TGKNAPCPCG SGRKYKMCHG
QNEK
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