| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0257 |
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| Symbol | appF2 |
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| ID | 6364559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 321619 |
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| End bp | 323628 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642679404 |
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| Product | oligopeptide ABC transporter ATPase |
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| Protein accession | YP_001954201 |
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| Protein GI | 189439120 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.691282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACA ACACCAACGC CAAGATGCTG GCTATGCAGA AAGAGCATGG TCCGCTGCTC
GAGGTCAAGG ATCTGGCCAT CGACTTCACC ACTGACACCG GCAAGCCGGT GCACGCGGTG
CGCGATGCCA ACTTCACCGT CTACCCTGGC CAGTGGGTGG CCATCGTGGG CGAGTCCGGT
TCCGGCAAGT CCACCTCCGC CATGGCCGTG CTGGGTCTGC TGCCCGGCAC CGGTCACGTG
GTCAACGGCT CCATCAAGCT CGACGGCGAG GAAATCGCCG GCGCCAAGCA GAGCGAGTTC
GACAAGCTGC GCGGCACCAA GATGGGTCTC GTGCCTCAGG ACCCGATGAG CAACCTCAAC
CCGGTGTGGC GTATCGGCAC CCAGGTCAAG GAAGCACTGA AGGCCAACAA CATGGACGTG
GCTCACGAAA AGCGCTCCGC CCTTGCCAAG GCTCTGGCCG GCGACGAGGT CGAAGTCAAG
GGCAACGACG ACGAGACCTT CCTCGGCGCC AAGGAACTGC CCGAGCTCAT GACCGAGGCC
AAGAAGGCTT TGACTGAAGC CGGCGTGTCC GGCGAGGCCT TCGACAAGGC CGTCGCCCGC
TTCACCAACG AATGGGTTCC GGGCTCCGAA ACCCGTTGGC GCGTGGCCGA CGACCTCATC
AAGGCCGGCG TGGCCGACGA CCAGGCCTGG TATCTGGCTA AGAAGTACGT CACCGGCTCC
ACAATGGATG ACCGTATCGC GGGTCTGCTG TCCGAGGCCG GTCTGCCCGA CGCCGCTACC
CGTGCCCGTC AGTTCCCGCA CGAGTTCTCC GGTGGTATGC GCCAGCGCGC GCTCATCGCC
ATCGGCTTGG CCTGCCGCCC CGATCTGCTG ATCGCCGACG AGCCGACCTC CGCCCTCGAC
GTGACCGTGC AGAAGCGCAT CCTCGACCAC CTGCACATGC TCACCGACTC GTTGGGCACC
GCCGTGCTGT TCATCACCCA CGATCTGGGC CTTGCCGCTG AGCGCGCCCA GCACATTGTC
GTGATGTACA AGGGTCAGGT CGTCGAATCC GGCCCATCCC TTGAAGTGCT CCAGCACCCG
CAGCACCCGT ACACCAAGCG ACTGGTGGCC GCTGCCCCGT CGCTGGCCTC CCAGCGCATC
ATCTCCGCCA AGGAGCGTGG TGAGGATGCG GACGCTCTGC TCGATCACCA CATCGCCGGC
GAAAGCACGC TCGAAAAGAG CGAGCACATC ATCACCGTCG ACCACCTGAC CAAGGAATTC
AAGCTGCCCC GCAAGAAGGA GATGTTCAAG GCCGTCGATG ACGTGTCCTT CTCCGTCAAG
CGTGGCACCA CACTGGCCAT TGTGGGCGAA TCCGGTTCCG GCAAGTCCAC CGTGGCGAAC
ATGGTGCTTC ACCTCCTGAA GCCCACTTCC GGCAAGGTGT TCTACGAAGG CCGCGACACC
TCCACGTTCA AGGCCAAGGA TCTGCTCGGT TTCCGCCGCC ACGTTCAGCC GGTGTTCCAG
AACCCCTACG GTTCGCTCGA CCCGATGTAC TCCATCTTCC GTTCCATCGA GGAGCCGCTG
CGCATCCACA AGATCGGCGA TTCCAAGTGG CGAGCCAACC GTGTCAAGGA ACTGCTGGAC
ATGGTCGAGA TGCCGGCTTC CGTGATGGGC CGTTACCCGA ACGAGCTCTC CGGTGGCCAG
CGCCAGCGTA TCGCCATCGC ACGAGCCATG GCCTTGGACC CGGACGTCAT CGTGTGCTAT
GAGGCCGTGT CCGCTTTGGA CGTGCTGGTG CAGGACCAGG TGTTGCGCCT GCTCAACGAT
CTGCAGGCCG AAAAGGGCCT GAGCTACCTG TTCATCACCC ACGATTTGGC CGTGGTTCGC
CAGATCGCCG ACGAGGTTGT GGTGATGCAG CACGGCAAGC TCGTGGAGCA CGCCACCACC
GACGAGGTCT TCGACCACCC GCAGAAGCAG TACACCCGAG ACCTGCTCGA CGCCATCCCC
GGCGGCAAGC TCCAGCTCGG TTTGGACTGA
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| Protein sequence | MTDNTNAKML AMQKEHGPLL EVKDLAIDFT TDTGKPVHAV RDANFTVYPG QWVAIVGESG
SGKSTSAMAV LGLLPGTGHV VNGSIKLDGE EIAGAKQSEF DKLRGTKMGL VPQDPMSNLN
PVWRIGTQVK EALKANNMDV AHEKRSALAK ALAGDEVEVK GNDDETFLGA KELPELMTEA
KKALTEAGVS GEAFDKAVAR FTNEWVPGSE TRWRVADDLI KAGVADDQAW YLAKKYVTGS
TMDDRIAGLL SEAGLPDAAT RARQFPHEFS GGMRQRALIA IGLACRPDLL IADEPTSALD
VTVQKRILDH LHMLTDSLGT AVLFITHDLG LAAERAQHIV VMYKGQVVES GPSLEVLQHP
QHPYTKRLVA AAPSLASQRI ISAKERGEDA DALLDHHIAG ESTLEKSEHI ITVDHLTKEF
KLPRKKEMFK AVDDVSFSVK RGTTLAIVGE SGSGKSTVAN MVLHLLKPTS GKVFYEGRDT
STFKAKDLLG FRRHVQPVFQ NPYGSLDPMY SIFRSIEEPL RIHKIGDSKW RANRVKELLD
MVEMPASVMG RYPNELSGGQ RQRIAIARAM ALDPDVIVCY EAVSALDVLV QDQVLRLLND
LQAEKGLSYL FITHDLAVVR QIADEVVVMQ HGKLVEHATT DEVFDHPQKQ YTRDLLDAIP
GGKLQLGLD
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