| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0242 |
|---|
| Symbol | nadB |
|---|
| ID | 6363060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 304417 |
|---|
| End bp | 306048 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642679389 |
|---|
| Product | aspartate oxidase |
|---|
| Protein accession | YP_001954186 |
|---|
| Protein GI | 189439105 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.032501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA CTGAAATCGT CGTCGTGGGC GCAGGCGTCG CCGGACTGTC CGCGGCACTG
GCCGTGGCCG GCACCGGACA CGACGTGACC TTGGTAACCA AGGCCGGACT GGTGGAATCG
AACACCTATC ATGCGCAGGG CGGCATCGCC GCGGCCATCT TCTCCGACGA CGACCCGAAG
CTGCACGCCG CCGACACCAT GGCCGCGGGC CACGGCCTGT GCGACCCGAA GGCCGTGGAC
ATCCTCACCC GTGAGGGTGC GGAGCGCGTC CGCGAGTTCG CCGCGGCCGG CGTCCACTTC
GACCGCGACG CGCAGGGACA CATGCTGCGC GGCCTGGAAG CGGCTCATTC GCGCGCCCGC
GTGGTGCATG CCGGGGGAGA CGCCACCGGC AAAGTGCTCG AACTGGACGT CTCCGCCATG
GTGTGCAAGA ACCCGCGCAT CCACATTATC GAGAACGCCT TCCTCAAAGA TCTCATCGTG
CGGGACGGCC ACATCGCCGG CGTCCGCCTG CTGATCGACG GGCAGGACAA GGATCTGGCC
GCCGGCCGGG TGATCTTGGC CACCGGTGGC GCGGGTCGTA TGTACCCGTA CACCACCAAT
CCGCCGGTCT CCACTGCGGA CGGTCTCGCC GCCGCATGGC GTGCGGGCGC CCAGGTCGCC
GATCTGGAGT TCTACCAGTT CCATCCCACC GCCATGGCCG TGGGCGAGCA CTTCCTCGTC
TCCGAAGCCG TGCGCGGCGA AGGCGCGGTG CTGCTGGACG AACACGGCCA CCGGTATATG
AAGGACATCG ATCCGCGCGC CGAACTCGCA CCGCGCGACG TCGTGGCCCG CGAGAACTTC
CGCGTGATGC AGGCGCAAGG TGGCAAGCCC GTGATGCTCG ACGTCTCGCC GATGACCCGC
GAGAACCCCG ACCTGGCCAG CTTCCTGGCC CACCGATTCC CGACCATCGA TGCCTATACG
CGTTCGCTTG GCTTCGACTG GAGCAAGGAG CCGATCCCGG TGGCGCCCGC CGCGCACTAC
TACATGGGAG GCATTCGCAC CGATCTGGAC GCCCGGACCT CCATCCCCGG CCTGTACGCG
GCCGGCGAAT GCGCTCGTAC CGGTGTCATG GGCTCCAACC GCCTTGCCTC CAACTCGCTG
CTCGAAGGAC TTGTCTACGG ACGCCGCGCC GGTCTTGCCG CCGTCGCGGA CGGTGACGAC
GCGGTCTGGG CACCCGAACC GTTCCTGAAC TCCGCCACCG GTGCCGTGTT CGACCATGCG
CCGATCGCGC TGGCCGCTCC TGCCACTACG GCTGCTGCTG ACGATACCGC CGCCGACAAG
GTCTGGGACC GTACCCGCAT CCAGAACACC ATGTGGCATG GCGTCGGCGT GCTGCGCGAC
GAGGCCGGAC TGAAAACCGC CATCGCCGAA CTCGGCCAAG GCCTCGCCGC CGCAAACGCC
CAGGCTGATG TAAACGCCGA TGGTGCTGCA AGCAGCGTTG AGGCTTTGGA GAACCGCAAT
ATGCTCACCG TAGGCTATGT GGCCGCCATC GCCGCGCTCG CCCGCACCGA GTCGAGAGGC
GCCCACGCCC GCACCGACTA CAGCGAGCCA GTCGACAACT GGGCCCACTC CGTCGCCTAC
ATCAAGGACT GA
|
|---|
| Protein sequence | MSNTEIVVVG AGVAGLSAAL AVAGTGHDVT LVTKAGLVES NTYHAQGGIA AAIFSDDDPK
LHAADTMAAG HGLCDPKAVD ILTREGAERV REFAAAGVHF DRDAQGHMLR GLEAAHSRAR
VVHAGGDATG KVLELDVSAM VCKNPRIHII ENAFLKDLIV RDGHIAGVRL LIDGQDKDLA
AGRVILATGG AGRMYPYTTN PPVSTADGLA AAWRAGAQVA DLEFYQFHPT AMAVGEHFLV
SEAVRGEGAV LLDEHGHRYM KDIDPRAELA PRDVVARENF RVMQAQGGKP VMLDVSPMTR
ENPDLASFLA HRFPTIDAYT RSLGFDWSKE PIPVAPAAHY YMGGIRTDLD ARTSIPGLYA
AGECARTGVM GSNRLASNSL LEGLVYGRRA GLAAVADGDD AVWAPEPFLN SATGAVFDHA
PIALAAPATT AAADDTAADK VWDRTRIQNT MWHGVGVLRD EAGLKTAIAE LGQGLAAANA
QADVNADGAA SSVEALENRN MLTVGYVAAI AALARTESRG AHARTDYSEP VDNWAHSVAY
IKD
|
|---|
| |