Gene BLD_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0239 
Symbol 
ID6363057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp301313 
End bp302029 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content63% 
IMG OID642679386 
Productputative transcriptional regulator 
Protein accessionYP_001954183 
Protein GI189439102 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.475258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGAAC GGATTGACGC AACGAATGCA ACCGAGCACA TGGCGGATGC CGAATCGACG 
GCTGAATCCG CAAAGGCCGA GGTGAGGGGA GTGGAGGAGA CGCGCCCCGA ATACGTGGAT
TTCACGGTAG ACGATTTTCC CGGCGGGCTG CCCGCATGTC TGGAAGCGAT TCTGATGGTC
GCCGACCAGC CGCAGACCGC CACCGAGCTG GCCCGCATTT TGGCATTGGA CCGCAACACA
GTCGAAGAGG CATTGCAAGC CCTGCACGAT GACTATGAGG GCGATGAATC CCGTGGCATC
CGCCCGCGCG GCTTCGAACT GCGCCGCACC GCTCGTGGCT GGCAGTTCGC CAGTCGCGCC
GCGTTCGAGC CGGTCGTCTC ATCATTCGTC ACCGACGGCC AGACTGCGAG ACTCAGTCAG
GCCGCACTGG AGGCGCTTGC CATCGTGGCC TATCGCCAGC CCGTCACCCG AGCCCAAGTG
GCCGCGATCC GCGGTGTCAA CTCCGATGGC GTGATTCGCT CGCTCACGGT ACGCGGCCTT
ATCAAGGAAG ACGGCGTGGA CCCCGAATCC CGCGCAGCCC TTTTGGTCAC CTCCGAGTTC
TTCCTCGACC AAATGGGCCT GAAGAGTCTC GACGAACTAC CCTCCCTAGC GCCGTTCCTC
CCGTCCGTCG CCGAAATGAC ACAGTCGAAA TCGGGGGATA CGGACGTGAT TTCGTAG
 
Protein sequence
MTERIDATNA TEHMADAEST AESAKAEVRG VEETRPEYVD FTVDDFPGGL PACLEAILMV 
ADQPQTATEL ARILALDRNT VEEALQALHD DYEGDESRGI RPRGFELRRT ARGWQFASRA
AFEPVVSSFV TDGQTARLSQ AALEALAIVA YRQPVTRAQV AAIRGVNSDG VIRSLTVRGL
IKEDGVDPES RAALLVTSEF FLDQMGLKSL DELPSLAPFL PSVAEMTQSK SGDTDVIS