Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0239 |
Symbol | |
ID | 6363057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 301313 |
End bp | 302029 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642679386 |
Product | putative transcriptional regulator |
Protein accession | YP_001954183 |
Protein GI | 189439102 |
COG category | [K] Transcription |
COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.475258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTGAAC GGATTGACGC AACGAATGCA ACCGAGCACA TGGCGGATGC CGAATCGACG GCTGAATCCG CAAAGGCCGA GGTGAGGGGA GTGGAGGAGA CGCGCCCCGA ATACGTGGAT TTCACGGTAG ACGATTTTCC CGGCGGGCTG CCCGCATGTC TGGAAGCGAT TCTGATGGTC GCCGACCAGC CGCAGACCGC CACCGAGCTG GCCCGCATTT TGGCATTGGA CCGCAACACA GTCGAAGAGG CATTGCAAGC CCTGCACGAT GACTATGAGG GCGATGAATC CCGTGGCATC CGCCCGCGCG GCTTCGAACT GCGCCGCACC GCTCGTGGCT GGCAGTTCGC CAGTCGCGCC GCGTTCGAGC CGGTCGTCTC ATCATTCGTC ACCGACGGCC AGACTGCGAG ACTCAGTCAG GCCGCACTGG AGGCGCTTGC CATCGTGGCC TATCGCCAGC CCGTCACCCG AGCCCAAGTG GCCGCGATCC GCGGTGTCAA CTCCGATGGC GTGATTCGCT CGCTCACGGT ACGCGGCCTT ATCAAGGAAG ACGGCGTGGA CCCCGAATCC CGCGCAGCCC TTTTGGTCAC CTCCGAGTTC TTCCTCGACC AAATGGGCCT GAAGAGTCTC GACGAACTAC CCTCCCTAGC GCCGTTCCTC CCGTCCGTCG CCGAAATGAC ACAGTCGAAA TCGGGGGATA CGGACGTGAT TTCGTAG
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Protein sequence | MTERIDATNA TEHMADAEST AESAKAEVRG VEETRPEYVD FTVDDFPGGL PACLEAILMV ADQPQTATEL ARILALDRNT VEEALQALHD DYEGDESRGI RPRGFELRRT ARGWQFASRA AFEPVVSSFV TDGQTARLSQ AALEALAIVA YRQPVTRAQV AAIRGVNSDG VIRSLTVRGL IKEDGVDPES RAALLVTSEF FLDQMGLKSL DELPSLAPFL PSVAEMTQSK SGDTDVIS
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