| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0234 |
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| Symbol | rplT |
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| ID | 6364104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 294907 |
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| End bp | 295290 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642679381 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001954178 |
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| Protein GI | 189439097 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.163315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGTG TCAAGCGCGC AGTGAACGCC CACAAGAAGC GTCGCGTTGT TCTCGAGAGG
GCTTCCGGCT ACCGTGGCCA GCGCTCCCGC CTGTACCGCA AGGCCAAGGA ACAGCTGCTG
CACTCCTTTA ACTACAACTT CCGTGACCGC AAGGCTCGCA AGGGCGACTT CCGCAAGCTG
TGGATCCAGC GCATCAATGC TGCCGTCCGC GCTGAGGGCA TCACCTACAA CCGCTTCATC
CAGGGCCTGC GTCTCGCCGG CATCGAGCTG GATCGTCGCG CTCTGGCTGA GATCGCCGTC
TCCGACCCGG ACACCTTCAA GACCATCGTG GACGCCGCCA AGGCCGCCCT GCCTGAGGAC
GTCAACGCTC CGGTTGAGGC CTGA
|
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| Protein sequence | MARVKRAVNA HKKRRVVLER ASGYRGQRSR LYRKAKEQLL HSFNYNFRDR KARKGDFRKL
WIQRINAAVR AEGITYNRFI QGLRLAGIEL DRRALAEIAV SDPDTFKTIV DAAKAALPED
VNAPVEA
|
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