| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0231 |
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| Symbol | speE |
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| ID | 6364101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 292668 |
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| End bp | 293672 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642679378 |
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| Product | spermidine synthase |
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| Protein accession | YP_001954175 |
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| Protein GI | 189439094 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCAGCG CCGTGATCTT CGTGGCCACG TCCTGCGTCT CGCCCCTGAC CGGCTTCGCG
TTCTGGGAAA CCAACCTGGC CTATGAGGGC GAGTCCATCT ACAACTACCT GCAGGTCAAG
AACCTCTCCG ACCGCACGAT CCTGTCCACC AACGTGCTGT TCGGCGTGCA GTCCGTCACG
ATGAAAGACA AAGGACTGAC AGGTATGTAC TACGACACGG CCCTGGCTGC GCCGGCGCTC
GCCGACAATG CCAATTCCGC GCTGATCCTC GGCATGGGCA CCGGCACCTA CGCCCGCCAG
CTGAAGCAGT ATTATCCGAA AATGAACATC ACCGGCGTGG AGATTGACCA GAAGATCACC
GATCTGGCCG GCGAATACTT CGATGAGCCC GCCGACATCC CCGTGACCAC GTATGACGGC
CGAGCCTGGC TCGCCGCCTC GCATGACAAG TACGACGTGA TCATGGTCGA TGCGTATCAG
GACATCACCA TTCCCTTCCA GATGAGCTCC ACCGAGTTCT TCACCATGGT CAGAGAGCAC
CTGAACCCCG GCGGCGTGAT GGTGGTGAAC ATGAACATGA TCTCGGACGG CCAAGGTTCG
ATCAACGAGG CGTTGAGCGA TACCATCGCC AGCGTGTTCG GCAATGGGAA CACACTGACG
GCCGACGTGC CGAACACCAC GAACCGTGAA CTGTTCGCCA AGAAGCCGGG TTCCGGCTCC
GAAGAGAACT CCATGCAGCA GGCCTCCAAG GCGCTCAACC TGCGTGAGAC CACCTACGAG
CGCACCGGCA GCGAAGATCT CGAATGGTAT ATGGAAGAGG TCGCCTCTCG ATTCCGGAAG
GTGAACGAAC CGGACTCAGC GTCGACTATT CTCACCGACG ACAAGGCGCC GGTCGAAGTA
CTCGGCATGC ATGCCATCGA TCAAATCATC GCCGATGAGG CCGGCCCATA TCGGCAGATT
CTCAAAGACG AAGGCTTCGG CGGTCTGCTG CGCGCCGTGC AGTAG
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| Protein sequence | MVSAVIFVAT SCVSPLTGFA FWETNLAYEG ESIYNYLQVK NLSDRTILST NVLFGVQSVT
MKDKGLTGMY YDTALAAPAL ADNANSALIL GMGTGTYARQ LKQYYPKMNI TGVEIDQKIT
DLAGEYFDEP ADIPVTTYDG RAWLAASHDK YDVIMVDAYQ DITIPFQMSS TEFFTMVREH
LNPGGVMVVN MNMISDGQGS INEALSDTIA SVFGNGNTLT ADVPNTTNRE LFAKKPGSGS
EENSMQQASK ALNLRETTYE RTGSEDLEWY MEEVASRFRK VNEPDSASTI LTDDKAPVEV
LGMHAIDQII ADEAGPYRQI LKDEGFGGLL RAVQ
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