| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0219 |
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| Symbol | smc |
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| ID | 6363080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 278483 |
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| End bp | 282160 |
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| Gene Length | 3678 bp |
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| Protein Length | 1225 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642679366 |
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| Product | chromosome segregation ATPase |
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| Protein accession | YP_001954163 |
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| Protein GI | 189439082 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCTCA AGGAACTCAC CCTCCGCGGA TTCAAATCCT TCGCCTCCGC CACCACGCTG
CGCTTCGAGC CCGGCATCAC GGCGGTCGTC GGCCCCAACG GTTCGGGCAA GTCGAACATC
GTCGACGCCC TGATCTGGGT GATGGGTGAG CAGGGCGCCA AAAACCTGCG CGGCACTTCG
ATGGAGGACG TGATTTTCGC AGGCACGTCC TCTCGCCCGC CATTAGGCCG TGCACAGGTG
AGCCTGACCA TCGATAATTC CGATCACACG CTCGATATCG ATTACACGGA AGTCACCATC
TCCCGCACCA TCTTCCGCAA CGGAGGCTCC GAATACGCGA TCAACGGCTC GCAATGCCGC
CTGCTCGACA TTCAGGAACT CCTCTCCGAT ACCGGTCTTG GCCAGCAGAT GCATGTGATC
GTAGGCCAGG GACGATTGGA TGCGATTCTG AAGGCCGACC CGTCCGGCCA CCGTGCGTTC
ATCGAAGAGG CCGCCGGCAT CCTGAAGCAC CGCAAGCGCA AGGAACGCGC GTTGCGCAAG
CTGGCCAATA CCGAAACGAA CCTGAGCCGA CTCGACGATT TGCTGGGGGA GATTCACCGC
CAACTCGGCC CCCTCGGACG CCAGGCACGT ATCTCCCGGC GCGCCGACGC GATTCAGATA
TCCGTACGCG ACGCCCAAGC CCGCCTGTAC GCCGAAGACG CTCAACGCTC GATGAGCCGT
CGCGACACGG TACGTCAAGA GCTTGGCGCT GTGCGTAACC AGCTGGCCGT CGCCCAACGT
GAACTCGCCC AAGTCAAAGT ACGCATCGAA CAGGTCGAGG CGTTGAGCTC CGAATCCAGT
CCGGCCATCG CCAAGGCCAA CCAATACTGG CATGAATTCT CGCAGACCCG TGAACGACTG
AACGCGCTCG CCCAGTTGGC CGAAGAGCGC AGCCGGTCAC TCGCCGGCCA GATCGTCACC
AACTTCGGTG AGGATCCCGG CATGCTTGTC AAACGAGCCG AGGAACTGGA GTCTCAGGCC
GCGGCACAGA CCAAGGCCGT GGCCGATGCG CGCATCGCAC TCGACAAGGC CACCGAGGAA
CGCGCCGACG ACGAGAAGAA GCTTGCTTCA GTCCGTCAGA CCTTGACGGA ACTGCGCAAA
ACCGCACAGG AGCGCGATGC GCAAATCGCC CGACTGCGCG AACTCATCGC CCGCGAGGAA
TCCGCCGTGC AACTGGCGAC CAGCCGCGCC AAGGATTACG CCTCCCAACG TGACTCGCTG
ACTTCCCAGC GCGACGATGC CCAGCAACAG CTGGACGCAT TGCGCAGCGA AGCGGACTCC
ATTGCCGACG ATGACGGTGC CGCATTGGAC GCCGCACGTG CGACGCTCGC CGAATGCCGC
GAACGACTGA ATGAACGCGC CGATAAGCAG CGCGAGATAC AGTCCAAGAT CATCTCGCTC
AAAGCCAAGG CCGATGCGCT TGCCGACACG CTAGGCAGCC GCAATGCTTC CGGATCGTTG
GAGCGTGATA CGGACGTGGC CTCGCTTGGC CGACTCACCG ACTTCATCCA TGTGGCCGAA
GGCTGGGAAG ATGCCGTGGC CCACGCGCTC GACCAGTATG CCAGCGCCAT CGTGGTGCCC
GAGGCAGGCA ACATGTTGCA CGCCCTCGAA CGCGCTCGGG AAGATAAGCT CGGCAAAGCC
GTGGTGCTGA CCGCGAGCAT TGCCGGCGAT CCCGCCACAG AGCCGGGCAC GGAGTCGGAG
GAGAGTAGCG CCGAGAACGC GGGGGCCGCT CCGCAATCGG GCAACGCGCT GGCAGCACTC
GTCACCGCGA ACCCGGATGC CGAGAACCCG GCACAGGCCG AAGCGGTCGT GCGCACCGTG
CGTCTCCTGC TGGCTGATGT AGCCGCGGCC GGCACCGCCG ACGAAGCCCA ACAGATTGTG
GCATTCGGCG AAGCCATGCG GGCCGTCACC AAGAACGGCG AGACCTTCAC ACACGGCGTG
GCGGCGGTCG GCGGCTCTTC AATCTCTCAA TCGGACCTGT CTCTGGCCGC CCGCCGAGAC
AAAGCATTGG CACAGGTCAA ACAGTTGACC GCCCAAGACG GCGGAATGGC TGAGCAAGTG
GCCGAGGCCA AAACCAAGCG CGATGAAGCG GCTCGACTCG TCGACCAGGA ATCCGCCAAA
CGCACCGAAG CCCGGCTCAA AGCCCAGCAG GCGGAGAAAT CTCTGAAATC CGCCACAGAT
CGCGTCGCAT CGTTCACCCG TCAGCTCGAG CAGCTGGATA GGAAAATCAC CGAGACCCAA
GAGAATTGCA ACGAGCATCA GCTCAAGCTT GACGACCTCA ATCGCGCTTT GGCATCGGCC
CAGCAATCCA CAGCGGAACA TGCCGATTTC GACGAACTCG ATGAACGCGA ACGCACGCTG
GAGCGCGAAC TGAACCTGAC TCGCGAGCAT GAGGTCGCCG CAAAAATCGC GTGGACCGAA
GCAAGCCGCA AAGGGGAGTC ACTGAGCCGA CAGGCCGGGC TGCTGCGGGA CAACGCCAAA
GAAACCGCCG AACGCCGCGC CCGCATCGAG GCGTTGAACG ATCGCAGACG CGAGCAGGCC
GCACACCTGC AAGGCGTGGC CGATGACGCG CGAGCAGTGG CCGCCATGGT AGAGCATACG
CTGCATGACG TGGCCGCCAA ACGAGACGAG CTGCAGGCCG CCGCCTCCAG CCATGACGAG
GAACTCAAGG CCCTGCGCGC GCAGCGCAAC CAGATCGAGC CCAAGGTCAC CGATCTGACC
GGGCGCGAAC ATGCCTTGGA TGTAAACCGC GAACGGTTGG CCGCCGAATC CGGGCAGCTC
ATGCAAAAAG TGTCCGACGA ACTCGGTCTC ACTTTGGAGG AATTGGTTAG TGATTACGGC
CCCGAACAGC CGGTGCCCGT GCTGGATGAT GAGGGCAACC CTGTGCCGTT GGATGAGACG
GAAGCTGAGG CTGAGACCGA AGAGGGAGAA ACCGGGGGAG AGACCGGCAC CAACGGCGAT
TCCGACCGCT TTAAGACCGT GCCGTATAAC CGTCAGGAGC AGAAGAAGCG TCTCGATAAG
GCTCGCCGCG ATCTGGCCGC ACTCGGCAAG ATCAACCCTT TGGCCACCGA GGAATTCGAA
GCGCTTGAGG AGCGGAACAA GTATCTCAAT GATCAGCGCA ACGATGTGGT CAAATCACGT
GACGATTTGA TGCAGCTCAT CAAGGATCTC GATTCCACGA TGGTCCAGGT ATTCAAATCC
GCGTTCGACG ATACCGCCGA GGCATTCGAG CAGATGTTCG CCACGCTGTT CCCAGGCGGC
ACCGGGCGAC TGCGCCTGGA AAACCCGGAA GACATGCTCA CCACCGGCGT ACTGGTCGAG
GCCAGCCCGG CCGGCAAGCG TGTCAAACAG CTGAGCCTCC TGTCCGGCGG CGAACGTTCA
CTGACCGCGC TGGCGTTGCT GTTCGCGATT TTCACCGCCC GCCCCAGCCC GTTCTATGTG
ATGGACGAGG TCGAGGCCGC GTTGGACGAC GTGAACCTGA CCCGTTTGAT TAATGCGTTC
AATGAGCTAC GCGCCCATGC GCAGCTCATC ATTATTACTC ACCAGCAACG CACCATGTCG
ATTGCCGACG CGCTCTACGG CGTAACCATG CGAGCCGACG GCGTAACAGC CGTGGTGAGC
CAAAAACTCG AACGATAA
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| Protein sequence | MYLKELTLRG FKSFASATTL RFEPGITAVV GPNGSGKSNI VDALIWVMGE QGAKNLRGTS
MEDVIFAGTS SRPPLGRAQV SLTIDNSDHT LDIDYTEVTI SRTIFRNGGS EYAINGSQCR
LLDIQELLSD TGLGQQMHVI VGQGRLDAIL KADPSGHRAF IEEAAGILKH RKRKERALRK
LANTETNLSR LDDLLGEIHR QLGPLGRQAR ISRRADAIQI SVRDAQARLY AEDAQRSMSR
RDTVRQELGA VRNQLAVAQR ELAQVKVRIE QVEALSSESS PAIAKANQYW HEFSQTRERL
NALAQLAEER SRSLAGQIVT NFGEDPGMLV KRAEELESQA AAQTKAVADA RIALDKATEE
RADDEKKLAS VRQTLTELRK TAQERDAQIA RLRELIAREE SAVQLATSRA KDYASQRDSL
TSQRDDAQQQ LDALRSEADS IADDDGAALD AARATLAECR ERLNERADKQ REIQSKIISL
KAKADALADT LGSRNASGSL ERDTDVASLG RLTDFIHVAE GWEDAVAHAL DQYASAIVVP
EAGNMLHALE RAREDKLGKA VVLTASIAGD PATEPGTESE ESSAENAGAA PQSGNALAAL
VTANPDAENP AQAEAVVRTV RLLLADVAAA GTADEAQQIV AFGEAMRAVT KNGETFTHGV
AAVGGSSISQ SDLSLAARRD KALAQVKQLT AQDGGMAEQV AEAKTKRDEA ARLVDQESAK
RTEARLKAQQ AEKSLKSATD RVASFTRQLE QLDRKITETQ ENCNEHQLKL DDLNRALASA
QQSTAEHADF DELDERERTL ERELNLTREH EVAAKIAWTE ASRKGESLSR QAGLLRDNAK
ETAERRARIE ALNDRRREQA AHLQGVADDA RAVAAMVEHT LHDVAAKRDE LQAAASSHDE
ELKALRAQRN QIEPKVTDLT GREHALDVNR ERLAAESGQL MQKVSDELGL TLEELVSDYG
PEQPVPVLDD EGNPVPLDET EAEAETEEGE TGGETGTNGD SDRFKTVPYN RQEQKKRLDK
ARRDLAALGK INPLATEEFE ALEERNKYLN DQRNDVVKSR DDLMQLIKDL DSTMVQVFKS
AFDDTAEAFE QMFATLFPGG TGRLRLENPE DMLTTGVLVE ASPAGKRVKQ LSLLSGGERS
LTALALLFAI FTARPSPFYV MDEVEAALDD VNLTRLINAF NELRAHAQLI IITHQQRTMS
IADALYGVTM RADGVTAVVS QKLER
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