| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0213 |
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| Symbol | dppC1 |
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| ID | 6362992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 269320 |
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| End bp | 270489 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642679360 |
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| Product | dipeptide/oligopeptide/nickel ABC transporter permease |
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| Protein accession | YP_001954157 |
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| Protein GI | 189439076 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0101333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACCA CATCCCAAGA CAAGATCACC GTTCCCGGTG ACGACCGCCT CACCAAGCTC
AACGTCAGCA CCAAGACGCC GTTCTGGACC AAGATTCCAA TCATCAAGGA ACTGCGCGTG
GCGGTCGGCT GGCAGAAGGG CATGCTGATC ACCGGCCTCG CGATCACCGC GTTCTTCCTG
CTCGTGGCCC TCTTCGCCCC ACTGATCGCC CCCTACGGCC ACGCCCAGAT CAAGGCCGCC
GACGGCACGT CCTTCCCGGC GCAGGCCGCG CCCTCCGCCG AACACATCTG GGGCACCACC
GCCGCCGGAT TCGATGTGTT CTCCCGTGTG GTGTGGGGTG CCCGCACCGC CGTCATCGCC
ATCGTCGTGG CCGTACTGCT CTCCATCTTC GCCGGCGTGC TGCTCGGTCT GGTGTCCGGC
TACTACGGTG GCTGGGTGGA CCGCATTCTG GTAATGATCG CCGACGCCAT CTACTCCTTC
CCCTCGCTGC TGCTCGCCAT TCTGATGGCC ATCATGATCT CCCACGGCCA GTCCGGCCTG
TGGAGCGGCA TCCTGGCTTC CGGCATCTCC ATCACCGTGG TGTACATCCC ACAGTATTTC
CGCACAATTC GCGCCGAAGT GATCCGCATC AAGGAATCCG CGTATGTCGA GTCCGCGCGC
GTGGTCGGCG CCTCCACCTG GCGCATCATG ACCAAGCACC TGTTCAAGAA CTCCACCCGC
ACGTTGCCGG TGATCCTGAC GCTGAACTCG TCCGAAGCCA TCCTGACCCT CGCCGGCCTG
GGCTTCCTCG GCTTCGGCAT CGAGCCGACC GCCGCCGCCG AATGGGGCTA CGACCTGAAC
CGCTCGGTTT CCGACGTGAC CGCCGGCATC TGGTGGACTG CCGTGTTCCC GGGCATCGCC
ATCGTGCTCA TCGTGCTCGG CATCACGCTC GTGGGCGAAT CGCTCAACGA TCTGGCCGAC
CCGCGTCTGC GCGCACGCAA GTCCGCCGGC GAAGTGGTCG GATCGATCGA AGACACGTCC
GTCGACCCAA ACGAGAAGCC GACCGCACGC AACGAGGTGA TTGCCGAACT CGACGCGAAC
GTCGACCCGC CGGCCACCGT CACCGACCAT GACCCGACCA TCGTCGCCTC CGAATGGACC
GGCGAGGGCA AGCCGGAAGG CAAGGAGTGA
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| Protein sequence | MTTTSQDKIT VPGDDRLTKL NVSTKTPFWT KIPIIKELRV AVGWQKGMLI TGLAITAFFL
LVALFAPLIA PYGHAQIKAA DGTSFPAQAA PSAEHIWGTT AAGFDVFSRV VWGARTAVIA
IVVAVLLSIF AGVLLGLVSG YYGGWVDRIL VMIADAIYSF PSLLLAILMA IMISHGQSGL
WSGILASGIS ITVVYIPQYF RTIRAEVIRI KESAYVESAR VVGASTWRIM TKHLFKNSTR
TLPVILTLNS SEAILTLAGL GFLGFGIEPT AAAEWGYDLN RSVSDVTAGI WWTAVFPGIA
IVLIVLGITL VGESLNDLAD PRLRARKSAG EVVGSIEDTS VDPNEKPTAR NEVIAELDAN
VDPPATVTDH DPTIVASEWT GEGKPEGKE
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