Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0211 |
Symbol | ddpA1 |
ID | 6362990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 266427 |
End bp | 268061 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642679358 |
Product | dipeptide ABC transporter periplasmic protein |
Protein accession | YP_001954155 |
Protein GI | 189439074 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATTCCA AGAAGATTCT GGCCGCCGCC GTCTCCGTGG CCGCCATCGC ATCCCTGACC GCCTGCGGCG GTGTGAAGGA TGACACCACC GCAGGTGCCG ATTCCGGCAA CGCCATCACC ATCGGCACCA CCGATAAGAT CACCAGCCTG GACCCCGCCG GCTCCTACGA CAACGGTTCA TACGCCGTGC AGATCCAGGT GTTCCCGTTC CTGTACGCCC AGGACTACAA CACCTCCGAA CTGAGCCCGG ACATCGCCGC CGATGACGGT ACCTGGAACG ATGACGGCAC CGAATTCACC GTCAAGCTCA AGGACGGCCT GAAGTTTGCC AACGGCAACG ACCTGACCGC TTCCGACGTC AAGTTCTCCT ACGATCGCAT CAAGAAGATC AACGACCCGA ACGGCCCGAG CTCCCTGCTC GCCAACGTCG AATCCGTGAC CGCCAAGGAC GACACCACCG TGGTGTTCAA GGATTCCGTG CCTTTTGACG TGACTCTGAA GCAGGTCATG TCCAGCCCCG CCGGCCCGAT CGTCGATGAG GATACCTTCG ACGCCGACAA GCTCACCGAC GCCGACACCA TCGTCTCCAA GAAGGCCTTT GCCGGCCCGT ACACGCTGAC CGCCTTCAAG ATCAACGAGT CCGCCGCCTA CGCCAAGAAC GACTCCTACA AGGGCCTGAC CCCGGCCAAG AACTCCGCCG TGCAGGTCAA GTACTTCGCC GACGCCTCCA ACCTGAAGAT GGCCGTCCAG CAGGGCCAGA TCGACGTGGC CAACCGCTCC CTGAGCCCGA CCGACATCGA GGACCTCTCC AAGGACTCCA AGGTCAAGGT CGTCAAGGGC CCGGGCGGTG AGGAGCGCTT CATCGCCTTC AACTTCAAGA TTCAGCCCTA CGGCGAATCC CAGCCCGACG CCGACGCCAA CAAGGCCAAG GCCGTGCGCC AGGCCGTCGC CAACCTCATC GACCGCGAAG AGCTCTCCAC CAAGGTCTAC AAGGGCACCT ACACCCCGAT GTACTCCTTC ATCCCGGACG GCCTGGCCGG TCACGATGAC ACGCTGAAGT CCGCCTACGG CGACGGCAAC GGCAAGCCGA GCACCGAGAA GGCCAAGAAG GTCCTCGCCG ACGCCGGCGT CACCACCCCG GTCGACCTCA AGCTCCAGTA CAACAGCGAC CACTACGGCT CCGTCTCCGC CGACGAATAC GCTGCCCTGA AGTCCCAGCT TGAGGCAGGC GGCCTGTTCA AGGTCGACAT GCAGTCTACC GAATGGACCC AGTACAACAA GGATCGTGTG GTTACCGACG ATTCCGACGG TGTGTACCCG GTCTACCAGC TTGGATGGTT CCCGGACTAC TCCGACCCGG ACAACTACCT GTCCCCGTTC TTCCGCGATG GCAACTTCGT GAACAACGGC TACTCCAACA AGGAAGTCAA CGACCTGATC GTCAAGCAGG CCGGCGAGAA GGACGAGTCT GCTCGTGGAG ACATCCTCAA GCAGATTCAG AAGCTCGAGA CCGAAGACCT CTCCACCATC CCGCTGCTGC AGGGTGCCCA GGTCGCCGTC ACCGGCACCT CCGTGAAGGG TGTCACCCTC GACGCTTCCT TCCGCTTCCG CTATGCCTCC GTCACCAAGG GCTGA
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Protein sequence | MNSKKILAAA VSVAAIASLT ACGGVKDDTT AGADSGNAIT IGTTDKITSL DPAGSYDNGS YAVQIQVFPF LYAQDYNTSE LSPDIAADDG TWNDDGTEFT VKLKDGLKFA NGNDLTASDV KFSYDRIKKI NDPNGPSSLL ANVESVTAKD DTTVVFKDSV PFDVTLKQVM SSPAGPIVDE DTFDADKLTD ADTIVSKKAF AGPYTLTAFK INESAAYAKN DSYKGLTPAK NSAVQVKYFA DASNLKMAVQ QGQIDVANRS LSPTDIEDLS KDSKVKVVKG PGGEERFIAF NFKIQPYGES QPDADANKAK AVRQAVANLI DREELSTKVY KGTYTPMYSF IPDGLAGHDD TLKSAYGDGN GKPSTEKAKK VLADAGVTTP VDLKLQYNSD HYGSVSADEY AALKSQLEAG GLFKVDMQST EWTQYNKDRV VTDDSDGVYP VYQLGWFPDY SDPDNYLSPF FRDGNFVNNG YSNKEVNDLI VKQAGEKDES ARGDILKQIQ KLETEDLSTI PLLQGAQVAV TGTSVKGVTL DASFRFRYAS VTKG
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