| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0188 |
|---|
| Symbol | manA1 |
|---|
| ID | 6363225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 233751 |
|---|
| End bp | 236870 |
|---|
| Gene Length | 3120 bp |
|---|
| Protein Length | 1039 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642679335 |
|---|
| Product | alpha-mannosidase |
|---|
| Protein accession | YP_001954132 |
|---|
| Protein GI | 189439051 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0383] Alpha-mannosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCTGA AACCTGAACA GCAACTGGAG CGGTGCAAGC GCATAGTGCG CCAGCGCGTG
GACCCTCATA TCCACCCATC GATCGCACAG CTTGCGGTGG AGTCCTTTGA CATTCCCGGA
GAGCCGATGC CCACTGACGA GTTCTTCGAG AAGCTCAATC GAGGTGACAT CGACTTCAAG
CCGTTTACGC TCGGCGGTGA ATGGGGCACC ACATGGGGCA CAGTCTGGTT CCGCCTGACC
GGTACCGTGC CGGCCGGCTA CCCGAAAGGC AAGCCGCTGG AGCTCATCCT CGACCTCGGC
TGGTACCCGC ACTCCTGCGG CGGCCATATC GAGGGCCTCG TCTACCGTGC CGACGGCACC
GCCATCAAAG CCGTACACCC GCTCAACTAT TGGGTGCCGT TCATGGATGC TGAGGGCAAC
GCGCAAGTGC CGGTCGCCGA AGACGGCAGC TTCACCCTGT ACCTCGAAGC CGCCAGCAAC
CCGCTGCTGC TCGGCGTGCC TCCGTTCATT GAGACCGAAC TGGGCGACCA TGCCACCGGC
AAGCCGGACG AGCCGTACGT ATTCAAGTCC GCCGATCTGG CCGAATTCGA TGAACGCTAC
GAGAACTACT CCGTCGATCT CGACGTGGTG AGCTCCCTGA TGGAATTCGC CGACAAACAG
TCGCCGCGCT ACTGGCAACT CGCCAAAGCA TTGCAGCGTT CGCTGAACGC CTACGACGAG
CGCAACCCCG AATCCGTGGA AGCCGCGCGC GCAGCACTCG CCGGCGTACT GGCCAAGCCG
GCCAATGCCT CGGCCATGAA CGTCAGCGCC ATCGGCCACG CGCATATCGA CTCCGCATGG
CTGTGGCCGG TGCGCGAGAC CCGCCGCAAG GTGGCCCGCA CCGTATCCAA CGCATTGGCG
CTGATGGACG CCGACCCCGA CTTCAAATAC GCGATGAGCT CCGCCCAGCA GTACGCCTGG
CTGGAAGAGG ATCATCCGGA CATCTTCAAG CGCATGAAGC GGCGCATTGA AGAAGGCCGG
TTCATCCCGG TCGGCGGCAT GTGGGTGGAA GCCGATGGCA TGTTGCCCGC CGGTGAGTCA
CTGATCCGCC AGATTGCATA TGGCCGCAAA TACTTCAAGG AACATCTCGG TGTGGAGCCC
AAGGGCGTAT GGCTGCCGGA CAGCTTCGGC TACACCGGCG CATGGCCACA GATCGCCCGC
CGTGCCGGGT ACGAATGGTT CCTCACGCAG AAGATCTCGT GGAACGACAC CACCAAGTTC
CCGCACCACT CGTTCATGTG GGAAGGCATC GACGGCTCGC GCATCTTCAC CCACTTCCCG
CCGGCGGATA CCTATGCTGC TTGGTGCAAG GTTCAGGAAC TCGACTACGC CGAGAAGAAC
TTCCAGGACA AGGATCTCTC CGACCGCTCG CTTCTGCTCT TCGGTTTCGG TGATGGCGGT
GGCGGCCCCA CGCGCAACAT GATGGAGCAC CTGCATCGCT ATGAGAATCT CGAGGGCGTT
TCCAAGGTGA GCGTCGAAGA GCCGAACGAC TTCTTCGACA AGGCGCATCG GCAGCTTGCA
GAGAACGCCG GCCCGGAAAT GCCCGTCTGG AAGGGCGAGC TGTACCTCGA ACTGCATCGC
GGCACCTTGA CCTCGCAACA GGACATGAAA CGCGGCTGCC GCCAAGAGGA ATCGCTGCTG
CGCACGGTCG AATACCTGGG CGCGGCCGCC ACGTTGGCCG ACCCGAACTA CGCCTATCCG
CGCGAGGAGC TGGACCGCAT CTGGAAGACC CTGATGCTCA ACCAGTTCCA TGACGTGTTG
CCGGGGTCGT CCATCGCATG GGTGCACCGC GAAGCCCGCG AGGACTATCG CCGCGATCTG
AAGCGTCTCG CCGAAATCGC CCAAGACATG TGCGCCGTGC TGCGCAAGGC CAACCCGCAG
GCCGACCTGC TCGCCGAAGC CCGCATCAGC CAGTTCCGTA ATGACGGCGC GGCTTGGCGT
GCCAGCCGCA TCAACGAACC GACCAACGCG CTTTCCGTAC TGACCCAGGC ATTGGAGAAC
GGCCGTGTAC TGCTGGCCAA CGGCGTACTG TCCGTCACCA TCGAGGCCGA CGGTACAATC
TCGTCACTGC TTGACGAGGA GCATGGCCGT GAACTGGTTC CGGCCGGCAC CCGATTGGGC
CGATGCGAAC TGTTGAAGGA CGAACCCGCC GTTTGGGATG CCTGGGAGAT CGAACGCGAA
TCCCTGCTCA TGGCGAATGC CATGACCGGA TCAATCGAAT CGGTCGATAC CGAAAACGGT
GCGGCACGAG TCCGCGTGCG TACCGCCGAC GATGACACCG TCATCACCAC CACCATCACG
TTGCGCCCCG GTTCGCACAC GCTCGATTTC CACGCCGATA TCGACTGGCA CGAACGTGAA
CGCTTCCTCA AAGTCGATTT GCCGCTGGGT ATCGTGGCCG ACCAAGCGAC CTACGACTGC
CAGTATGGTC TGATCCGCCG CCCAATTGTC AAAAACACCG CATCCGACGA AGCCAAGTAT
GAGAGCAGCA CGAACCGTTT CGCCATTATC GGTGATGCCG GTTACGCCGC AGCCGTCATC
AACGGATCGG TATACGGGTC CGATGCCTCA CCGATCGCCG GGAACGCCGC CGAAGGTCGT
GACTCGGGCA CTATGTTCCG ACTGTCATTG CTCTCCGCGC CGACCTTCCC CGACCCGCGC
ACCGATATCG GCTCGCACGA GTTCGACTGG TCCGTGGTGG CCGACGCCAC GGTGGACCGT
GCGCTTGACG CCGCCGGTGT GCTCAACGCA CCGGTACTCC ATGATGTGCC CGATATCACG
CCGCTCGCCT CGATCGAGTC CGTCAATGGT ACCGTGGTGC TGGACTGGAT GAAGCTGGCC
GATGATGGTT CCGGCGACCT GATCGTACGT GCCTATGAGG CGGCCGGCGG CCAGGCCGAT
GCCATGCTGC ACGTCTGCCC GGCGCTCGCA GGCGCTTCGG TGCATGAGAC CAATGTGCTG
GAAGGCGACG ATCTGGCCGC CGACCTTCCA GTCGCGCTGC AAGACGGTAG ACAGAACGCC
GAAGGTGCCA CGCTGCACTT TGGCCCGTTC CAGCTCGCCA CCCTGCGCAT CACGCGCTGA
|
|---|
| Protein sequence | MFLKPEQQLE RCKRIVRQRV DPHIHPSIAQ LAVESFDIPG EPMPTDEFFE KLNRGDIDFK
PFTLGGEWGT TWGTVWFRLT GTVPAGYPKG KPLELILDLG WYPHSCGGHI EGLVYRADGT
AIKAVHPLNY WVPFMDAEGN AQVPVAEDGS FTLYLEAASN PLLLGVPPFI ETELGDHATG
KPDEPYVFKS ADLAEFDERY ENYSVDLDVV SSLMEFADKQ SPRYWQLAKA LQRSLNAYDE
RNPESVEAAR AALAGVLAKP ANASAMNVSA IGHAHIDSAW LWPVRETRRK VARTVSNALA
LMDADPDFKY AMSSAQQYAW LEEDHPDIFK RMKRRIEEGR FIPVGGMWVE ADGMLPAGES
LIRQIAYGRK YFKEHLGVEP KGVWLPDSFG YTGAWPQIAR RAGYEWFLTQ KISWNDTTKF
PHHSFMWEGI DGSRIFTHFP PADTYAAWCK VQELDYAEKN FQDKDLSDRS LLLFGFGDGG
GGPTRNMMEH LHRYENLEGV SKVSVEEPND FFDKAHRQLA ENAGPEMPVW KGELYLELHR
GTLTSQQDMK RGCRQEESLL RTVEYLGAAA TLADPNYAYP REELDRIWKT LMLNQFHDVL
PGSSIAWVHR EAREDYRRDL KRLAEIAQDM CAVLRKANPQ ADLLAEARIS QFRNDGAAWR
ASRINEPTNA LSVLTQALEN GRVLLANGVL SVTIEADGTI SSLLDEEHGR ELVPAGTRLG
RCELLKDEPA VWDAWEIERE SLLMANAMTG SIESVDTENG AARVRVRTAD DDTVITTTIT
LRPGSHTLDF HADIDWHERE RFLKVDLPLG IVADQATYDC QYGLIRRPIV KNTASDEAKY
ESSTNRFAII GDAGYAAAVI NGSVYGSDAS PIAGNAAEGR DSGTMFRLSL LSAPTFPDPR
TDIGSHEFDW SVVADATVDR ALDAAGVLNA PVLHDVPDIT PLASIESVNG TVVLDWMKLA
DDGSGDLIVR AYEAAGGQAD AMLHVCPALA GASVHETNVL EGDDLAADLP VALQDGRQNA
EGATLHFGPF QLATLRITR
|
|---|
| |