| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0179 |
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| Symbol | murD |
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| ID | 6362980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 224278 |
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| End bp | 225723 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642679325 |
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| Product | UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| Protein accession | YP_001954123 |
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| Protein GI | 189439042 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.036998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTAG CGGATAAGAC AGTGGTGATC GCCGGACTGG GGGTGTCCGG CACCTCGTTG
GCGGAGGTAT TGAGGGAACG CGGCACCCAC GTGATTGGCG TCGACGAGAG GAAGCCCGAG
GCCGATCTCC ACTCCTTTGA TGACGTGGAC TGGGACCACG TGGACTACGT CATGTCGTCC
CCGGTGTTCA ACCCCCGCAC CCCGTTCGTG CTGGAAGCCC AACGCCGTGG CATCCCCGTG
ATGAGCGAGG TGGAATTCGC ATGGCAGCTG CGTGTGAATA ACGAGCGCAC CGGTACTCCG
GCTCCATGGA TCGGCATCAC CGGCACCAAC GGCAAAACCT CCACCACCGA GATGACCTCG
GAAATGCTCA CCGCCTGCGG ACTCGACGCG CCGACCGCCG GCAATATCGC CTCCGGAGAC
ATGAGCATGA GCCTGTCTCG TTGCGCCACC AATCCGCAGC ACGACGTACT GTGCGTGGAA
CTGAGCTCCT TCCAATTGCA CTTCACCGAT TCGCTGGCAC TTGACTGCGC GGCGATCACC
AATATCGCCG ACGATCACCT CGACTGGCAT GGCGGGCGCG AGAATTACGC CGCCGACAAA
TCCAAGGTGT TCCACAACGC CAAACGCGCC ATCGTCTACA ATGCGCAGGA CGCCAAAGTC
AGCGAACTGG CGGCCGAGGC TCAGACTGCC GAAGGATGCC GCAAGGTGGG ATTCACGCTC
GAGGCCCCTC AAGCCGGCCA GATCGGCATT GAAGATGGCT GGATCGTGGA CAGGAGCGGC
GTGGCCGGCG GCGCAGTAGG AGAGTCGGTC AGACTGGCCG CCATCACCGA TTTCACGCAT
CTGGCAGAGC CGGACGGCTC ACTGTACCCG CATCTGGTGG CCGATGCATT GACGGCATTG
GCGTTGGTGC TGGGACTTGG CGCTGATCGC GATACCGCGT TGAAGGCGCT TACCTCGTTC
AAGCCGGGCG GCCATCGCAT CGAAACCGTG GCTGAGGCCG CAGTCGAGGG CGGCTCTGTT
CGTTTTGTGG ACGATTCCAA AGCCACCAAC GGCCATGCGG CACGCGCCTC GCTGTCCAGC
TTCCCGGCCA AGTCTGTGAT CTGGATTGCC GGAGGTCTGG CCAAGGGCAG TCGATTCGAG
GACCTGGTCA AGGACCAGGC ACACACCATC AAAGCGGCCG TCATCATCGG CAAAGACCAG
CAGCCGATGA TCGAAGCGTT TGCCAGCCAA GCTCCGGACA TCCCGGTGAC CATCATCGAT
CCCGAAGACA ACGATACCGT CATGGATCGT GCCGTCGAAG CCTGCGGCAC GTATACCGCC
GCCGGCGACA TCGTGCTTAT GGCTCCGGCC TGCGCCTCCA TGGACCAGTT CAAGTCCTAC
GCGGATCGAG GCAATCGATT CGCCGCCGCA GCCAAGACGT GGAGCGAGGT GCATGGCCTC
CACTGA
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| Protein sequence | MQVADKTVVI AGLGVSGTSL AEVLRERGTH VIGVDERKPE ADLHSFDDVD WDHVDYVMSS
PVFNPRTPFV LEAQRRGIPV MSEVEFAWQL RVNNERTGTP APWIGITGTN GKTSTTEMTS
EMLTACGLDA PTAGNIASGD MSMSLSRCAT NPQHDVLCVE LSSFQLHFTD SLALDCAAIT
NIADDHLDWH GGRENYAADK SKVFHNAKRA IVYNAQDAKV SELAAEAQTA EGCRKVGFTL
EAPQAGQIGI EDGWIVDRSG VAGGAVGESV RLAAITDFTH LAEPDGSLYP HLVADALTAL
ALVLGLGADR DTALKALTSF KPGGHRIETV AEAAVEGGSV RFVDDSKATN GHAARASLSS
FPAKSVIWIA GGLAKGSRFE DLVKDQAHTI KAAVIIGKDQ QPMIEAFASQ APDIPVTIID
PEDNDTVMDR AVEACGTYTA AGDIVLMAPA CASMDQFKSY ADRGNRFAAA AKTWSEVHGL
H
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