| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0152 |
|---|
| Symbol | hisD |
|---|
| ID | 6364387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 192052 |
|---|
| End bp | 193449 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642679298 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_001954096 |
|---|
| Protein GI | 189439015 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA ACATCATGCG AATCATTGAC CTGCGTGGTC AGAACCTGTC CCGTGCCGAA
CTGCTTGCCG CGATGCCGCG TGCTGCAATG GGTACTTCCG AAGCCACCGA TTTGGTGCGT
CCGATTCTGG ACGATGTCAA AGAACGCGGC GCCGCTGCCC TGCGCGACTT CGAGGAGAAG
TTCGATCACG TGCGTCCCAA GAACCTGCGC GTGCCGGTCG AGGCGATCAA GGACGCCCTG
ACCACGCTCG ACCCCGAAGT GCGCGCCGCC ATCGAGGAAT CGGTGCGCCG CGCCCGCGCC
GTGGCCGCCA ACCAGGTGCC GAAGGACTTC TACACCGACC TCGCCGAAGG CGCCCGCGTG
GCCGAACGCT GGATTCCGAT TCAGCGCGTC GGCCTGTATG TGCCCGGCGG CAAGGCCGTC
TACCCGAGCT CCGTCATCAT GAACGCTGTG CCGGCCCAGG CCGCCGGCGT CGAATCGCTG
GCCATCGCCA CCCCGCCCGC CCGCGACAAT GAGGAAGGCC TGCCGAACAA GACCATCCTC
GCCACCTGCG CCATCCTCGG TGTTGACGAG GTATACGCGG TCGGCGGCGC TCAGGCCATC
GCCATGTTCG CATACGGCGC CAAGGGCAGC GAGCCGCAGG ACGGCGACAT CCTGTGCGAT
CCGGTTGACA AGATCACCGG CCCGGGCAAC ATCTTCGTGG CCACCGCCAA GTCACTGGTC
TCCGCATTCG TGGGCATTGA CGCGGTCGCC GGCCCCACCG AAATCGGCAT CATCGCCGAC
GAAACCGCCA ACCCGAGCCT GCTGGCCGCC GACCTCATCG GCCAGGCCGA GCACGATGAG
CTCGCCGGTT CCGTGCTGTT CACCGACTCC ACCGAGATTG TCGACAAGGT GCAGGAGAAC
CTCAAGTACC GCGTGCCGCG TACCGAGCAC GCCGAGCGCG TCCACACGTC GCTGTCCGGC
ACCCAGTCTG CCATCGTGCT GACCGACGGT CTTGACCAGT CCATCGACGC GGCCAACGCC
TACGCCGCCG AACACCTTGA GATTCAGACC AAGGATGCCG ATGCTGTCGT CAAGCGCATC
AAGAACGCCG GTGCCATCTT CCGCGGCCCG TACTCCCCGG TGCCGCTGGG CGACTACATG
TCCGGCTCCA ACCACGTGCT GCCCACCGGC GGCACCGCCC GCTTCGCCGC AGGCCTCGGC
GTGCACACCT TCATGAAGCC GGTCGAAGTC ATCGAATACG ACGAGGAAGG CCTCAAGGCC
ATCGCCGCCC GTATCAACGC CTTCGCGGTG TCCGAGGACC TGCCCGCCCA CGGCGAGTGC
GTGCTCTCCC GCTTCGTCAA GGATCCGTAT GACAAGGCCA CCCTGCGCGA GCAGGAGAAG
GAAGCCGGTC TGCGATGA
|
|---|
| Protein sequence | MSENIMRIID LRGQNLSRAE LLAAMPRAAM GTSEATDLVR PILDDVKERG AAALRDFEEK
FDHVRPKNLR VPVEAIKDAL TTLDPEVRAA IEESVRRARA VAANQVPKDF YTDLAEGARV
AERWIPIQRV GLYVPGGKAV YPSSVIMNAV PAQAAGVESL AIATPPARDN EEGLPNKTIL
ATCAILGVDE VYAVGGAQAI AMFAYGAKGS EPQDGDILCD PVDKITGPGN IFVATAKSLV
SAFVGIDAVA GPTEIGIIAD ETANPSLLAA DLIGQAEHDE LAGSVLFTDS TEIVDKVQEN
LKYRVPRTEH AERVHTSLSG TQSAIVLTDG LDQSIDAANA YAAEHLEIQT KDADAVVKRI
KNAGAIFRGP YSPVPLGDYM SGSNHVLPTG GTARFAAGLG VHTFMKPVEV IEYDEEGLKA
IAARINAFAV SEDLPAHGEC VLSRFVKDPY DKATLREQEK EAGLR
|
|---|
| |