| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0145 |
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| Symbol | dnaE |
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| ID | 6363096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 170175 |
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| End bp | 173732 |
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| Gene Length | 3558 bp |
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| Protein Length | 1185 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642679285 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001954089 |
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| Protein GI | 189439008 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.789646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATT ACGGGAACAA CTTTGTGCAA CTGCATAACC ACACGCACTA TTCGCTGCTC
GATGGTGCGT CGAAGATTCC GGATTTGGCC AAACGCGCCG CCGAACTTGG CATGCCTGCG
GTCGGCATCA CCGACCATGG CAACATGCAT GGCGCCTACG AGATGTACAC CAACTGCGTG
GCCAATGGCG TCAAGCCCAT CATCGGCATC GAAGCTTACG TGACCCCGGA AACCGCGCGT
CAAGACAAGT CCCGTGTGCA CTGGGGCACC GAAGCCCAGC GCCGCGACGA CGTCTCCGGT
GGTGGTCTTA TCACCCACTT GACCATGTGG GCCGAAAACG ACGAAGGCCT GGTCAACCTC
ATCAAAGCCT CGTCCGTGGC CAACCTCGAA GGTCGCGTCA TGCGCTACCC GCGTATGGAT
AAGGAGGTGC TCGCCACCTA TTCCAAAGGT GTGATCGCCT CCTCCGGATG CCCTTCGGGC
ATCATCCAGA CTCGTCTGCG CCTCGGTCAA TTCGATGAGG CCCTGCGCGC CGCCGGCGAA
TTCCAGGACA TCTTCGGCAA AGACAACTTC TTCATCGAAC TCATGGATCA CGGTCTGACA
ATCGAGACCC AGGTCACCAA CGACCTGCTG ACCATTGCCA AGAAGCTGGA CGCCCCGCTG
CTGGCCACCA ACGATTCCCA CTACGTACAC GCCGAAGATG CACAGGCGCA GGACGCCATG
CTCTGCATCA ACTCCGGTTC CCGTCTTGAC GATCCGGACC GATTCAAGTT CGACGGCACC
GGCTACTACA TCAAAACCGC CGAAGAGATG CGCGAACTGT TCAAGGACCA CCCGGACGCC
TGCGACAATA CGCTCGTTAT CGCCGAGCGC TGCAACGTGA TGTTCGACGA CCACGAAGAC
GGCGCGTTCA TGCCGAAATT CCCTTGCCCC GAAGGCTGGG ATGAGACCTC CCTGTTCCTC
AAAAAAGTCG AGGAAGGTCT GGAGAAGCGT TACGACGGCA ACCCGCCGCT CGACGTATTG
AAGCAGGCCG ACTACGAATG CGGCGTGATC TGCCAGATGC AGTTCTGCGG ATACTTCCTC
GTGGTCGCCG ACTACATTCA GTGGGCCAAG GACCACGGCA TTATGGTGGG TCCGGGCCGT
GGTTCGGCCG CAGGCGCCAT GGTCGCCTAT TCCATGGGCA TTACCGAGCT CGATCCGCTC
AAGCATGGCC TGATTTTCGA GAGGTTCCTG AACCCTGAGC GAGTGAGCCT TCCTGATATC
GATGTCGACT TCGACCCTGA AGGTCGTGCG CGAGTCATCG AATACTGCGG CGAAAAATAC
GGCACCGATA AGGTCGCCCA GTGCGTGATC TATGGCACCA TCAAAACCAA GCAGGCCCTG
AAAGACTCCG CCCGCATCAT GGGTTATGAA TTCTCAGTCG GTGAAAAAAT CACCAAGGCG
CTGCCTCCGG CGGCCACCGG CGGCAAAGAC ATCAGCCTGC ATGACATCTT CGACCCGGCC
GCCAAACGTT ATGCCGAGGC CAGGGAATTC CGAGAACTCT ACGATTCCGA CCCGGACACC
AAGCGCATCA CCGAGGAAGC CAAGGGTATC GAAGGCCTGA TTCGACAGAC CGGTGTACAT
GCCTGCGCCA CCATCATGGG TAGCGCACCC ATCACCGACA CCTCGCCGTT GCTGGAACGC
ACCGATGGCA CCATCACCAC CACCTTCGAA TACCACACGT GCGAAACGTT GGGGCTGGTC
AAGATGGACT TCCTTGGCCT GTCCAACTTG ACGATCATCC ACGACACCCT GAAGAACATC
GAGGCCAACG GCAAACCCGC CATCGACTAC ACCAAGATTC CGCTCGATGA CGCCGAAACC
TACAAACTCA TGTCCCGAGG AGACACGCTC GGCGTGTTCC AGCTCGATTC CGACGGCATG
CGTTCACTGC TGAAAACCCT GAAGCCCGAT AACTTCAACG ATATTTCCGC ACTTATCGCC
CTGTACCGAC CGGGCCCGAT GAGTATGGAT TCGCACACCA ACTACGCCAA GCGCAAGAAC
GGCCTGCAGA AGATCACGCC AATTCACCCT GAGCTTGAGG AGCCTCTGAA GCAGGTGCTT
GACGAGACCT ATGGTCTGAT CATCTACCAG GAGCAGGTGC AGTCCGCCGC CCGAATCCTC
GCCGGTTATT CACTGGGCAA GGCAGACGTG CTGCGTCGAG CCATGGGTAA GAAGAAGCCC
GAAGTGCTGG CCAAGGAGAA GGTGCCGTTC TTCGCCGGTA TGAAGGAGCA TGGATACTCC
GAAGAGGCCT CCCAGGCCGT GTGGGATATT CTGGTGCCGT TCTCCGGCTA CGCTTTCAAC
AAAGCGCACT CCGCCGCATA CGGTCTGATC TCCTACTGGA CCGCATATCT GAAGACGCAC
TACCCGGTCG AATTCATGGC CGCCCTGTTG CAAGGTGCCG CCACCAACAA AGACAAGACC
GCACTGTACT TGGGCGAGGC CCGCCGCATG GGCATCCAGG TGCTCTCGCC GGACGTCAAC
GAATCGGTGT ACGAGTACTC GGCAGTCGGC GACGTCGTCC GATTCGGTCT TGGTGCCATC
CGTAACGTGG GTGACAAGGC CGTGGCCGAT ATCATCGCCG AACGCGAAGG CCCGCGCGGC
AAGTTCGTGA ACTTCATGGA CTTCATCCGC CGCGTGCCCC TGACCGCGCT GAACCGGCGA
TTGGTCGAAT CGTTGATCAA GGCCGGTGCC TTCGACTCGA TTGACCCGAA CCGTCGCGCG
CTGCTCACCG TGCACGAGGC CGCCATCGAT TCGGTGGTGA GTCTGAAGCG CAAACAGGCG
GAGGGCCAGT TCGATTTGTT CTCCGATGCC GAGGATGGGG GAGCGGAGGC CATGGGCGAC
GCTTCCGTGA CCGTACCCGA TCTTGAGGAA TGGGACAAGA AGACCAAACT TAACTTCGAA
CGCGAAATGT TGGGCCTGTA TGTGTCTGAC CATCCGCTCT CCGGTATGCA GTCGATTCTC
GCGTCCTTGC GTGAAATGTC CATCGCGCAT CTGGTTGATC GAGCCAAAAC GATGGGTGAA
GGACAGCAGG TCACGTTGGC TGGTTTGGTC ACCAATGTGG ACCGGCGCGT ATCCAAGAAG
GGCAACCCCT GGGCCATCGT GACCATCGAA GACATGGAAA GCTCCATCCA ATGCATGTTC
TTCGGCAAGG TCTATGAAGC GGCCGCCGCC GAACTTGCCG TGGACGCCAT CGTACAGATT
CGTGGCCAAG TGGAGTTGCG CGACGAAACC GTTTCTCTGA GAGCCACGGA AATGCGGATT
CCGACCTTGG AAGCCGAGGA TGAACGTCCG TTGGTCATCA CGCTGCCGCC GGTGGCGTTG
GAGCGCCAAC GCATGATGCA ACTCGGTCAG GTGCTCGCTA ATCATCCTGG TTACTGCGAA
GTACATCTTG CGGTGCTGGA TGAGAAGGGT AACGCTCAGG TGCTCACGTT TGGCGATCGT
TTCCGCGTCA AGCGAGATAC TTCGTTGTTT GCTGAGATCA AGATTCTGTT TGGCCCCAGC
TGCTTGCCTG CCGCCTGA
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| Protein sequence | MADYGNNFVQ LHNHTHYSLL DGASKIPDLA KRAAELGMPA VGITDHGNMH GAYEMYTNCV
ANGVKPIIGI EAYVTPETAR QDKSRVHWGT EAQRRDDVSG GGLITHLTMW AENDEGLVNL
IKASSVANLE GRVMRYPRMD KEVLATYSKG VIASSGCPSG IIQTRLRLGQ FDEALRAAGE
FQDIFGKDNF FIELMDHGLT IETQVTNDLL TIAKKLDAPL LATNDSHYVH AEDAQAQDAM
LCINSGSRLD DPDRFKFDGT GYYIKTAEEM RELFKDHPDA CDNTLVIAER CNVMFDDHED
GAFMPKFPCP EGWDETSLFL KKVEEGLEKR YDGNPPLDVL KQADYECGVI CQMQFCGYFL
VVADYIQWAK DHGIMVGPGR GSAAGAMVAY SMGITELDPL KHGLIFERFL NPERVSLPDI
DVDFDPEGRA RVIEYCGEKY GTDKVAQCVI YGTIKTKQAL KDSARIMGYE FSVGEKITKA
LPPAATGGKD ISLHDIFDPA AKRYAEAREF RELYDSDPDT KRITEEAKGI EGLIRQTGVH
ACATIMGSAP ITDTSPLLER TDGTITTTFE YHTCETLGLV KMDFLGLSNL TIIHDTLKNI
EANGKPAIDY TKIPLDDAET YKLMSRGDTL GVFQLDSDGM RSLLKTLKPD NFNDISALIA
LYRPGPMSMD SHTNYAKRKN GLQKITPIHP ELEEPLKQVL DETYGLIIYQ EQVQSAARIL
AGYSLGKADV LRRAMGKKKP EVLAKEKVPF FAGMKEHGYS EEASQAVWDI LVPFSGYAFN
KAHSAAYGLI SYWTAYLKTH YPVEFMAALL QGAATNKDKT ALYLGEARRM GIQVLSPDVN
ESVYEYSAVG DVVRFGLGAI RNVGDKAVAD IIAEREGPRG KFVNFMDFIR RVPLTALNRR
LVESLIKAGA FDSIDPNRRA LLTVHEAAID SVVSLKRKQA EGQFDLFSDA EDGGAEAMGD
ASVTVPDLEE WDKKTKLNFE REMLGLYVSD HPLSGMQSIL ASLREMSIAH LVDRAKTMGE
GQQVTLAGLV TNVDRRVSKK GNPWAIVTIE DMESSIQCMF FGKVYEAAAA ELAVDAIVQI
RGQVELRDET VSLRATEMRI PTLEAEDERP LVITLPPVAL ERQRMMQLGQ VLANHPGYCE
VHLAVLDEKG NAQVLTFGDR FRVKRDTSLF AEIKILFGPS CLPAA
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