Gene BLD_0140 details

Gene Information

• Locus tag: BLD_0140
• Symbol: lspA
• ID: 6363091
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: +
• Start bp: 166296
• End bp: 166844
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 642679280
• Product: lipoprotein signal peptidase
• Protein accession: YP_001954084
• Protein GI: 189439003
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0759445
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAACC AACAGGGACG GCTGCGCACC CGCGTGGCCG TCTTTGCATG TGTGGCCGCG 
GCTGCGCTGA TTGTCGATCA GCTCACCAAG GCTTGGGCGA TGGCCGCGTT ATCCAACGGT 
CAGACCATTC GAGTGATTCC CGGACTGCTG TCCTTCACCT TGGTGCGTAA TCCGGGCGCG 
TCCTTGGGCA TGGGATCAGG CGCTACTTGG GTAATCAGTC TGTTGGCCGT TGTGGCTTGC 
GTGGCCCTTG CTGTGGCTGG GGTGCGCACT GTCTCCATGA AATGGTCGGT GGCGATTTCT 
TTCGCGTTTG CAGGCGCTCT GGGCAACCTG ATTGACCGTG TTATGTACGC TGACGGCTTC 
CTCGACGGCA AAGTGGTGGA TTTCCTTAAC TATGGCTGGT CCGTTGGCAA TGTGGCGGAT 
ATCTATCTGG TAGTCGCCGG TGTGGTCCTG GTGATTCTGA TTCTTATGGG GGAGCCGTTC 
TCACACAAGG ATCTCATCGA GCAATCCGAC GAATCCCTAC AGTCTGAGCC GGAGGCGGAC 
GCCAAGTAA 

 

Protein sequence

MTNQQGRLRT RVAVFACVAA AALIVDQLTK AWAMAALSNG QTIRVIPGLL SFTLVRNPGA 
SLGMGSGATW VISLLAVVAC VALAVAGVRT VSMKWSVAIS FAFAGALGNL IDRVMYADGF 
LDGKVVDFLN YGWSVGNVAD IYLVVAGVVL VILILMGEPF SHKDLIEQSD ESLQSEPEAD 
AK