| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0134 |
|---|
| Symbol | glyRS |
|---|
| ID | 6363501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 159676 |
|---|
| End bp | 161148 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642679274 |
|---|
| Product | glycyl-tRNA synthetase |
|---|
| Protein accession | YP_001954078 |
|---|
| Protein GI | 189438997 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0139549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCAGT CCAAACTCGA TGAAGTCGTA TCCCTTGCGA AGCGTCGCGG CTTCGTGTTC
CCCGCCGGCG AAATTTACGG CGGCACCCGT TCCGCTTGGG ATTACGGCCC TCTCGGCGTC
GCTCTCAAGG ACAATATCAA GCGTGAATGG TGGCGCTCCA TGGTCGTCAC CCGTCCTGAT
GTCGTCGGTG TCGACACTTC CATCATTCTG CCGCCCGAAG TGTGGGTGGC GTCCGGCCAC
GTGAGCGTGT TCAACGATCC GCTCGTCGAG TGTCTCAACT GCCACAAGCG CAACCGCGCC
GACAAGCTCG AGGAATCCTA CGCCGAGAAG CACGGCGACA AGATGCCGGA AAACGGCATG
AAGGACATCG TCTGCCCGAA CTGCGGCACC CGTGGCCAGT GGACCGAACC GCGCGACTTC
AACATGATGC TGCGCACCCA CCTCGGCCCG GTCGAGGACG AGAACAGCCT GCACTACCTG
CGTCCGGAGA CTGCACAGGG CATCTTCGTG GACTTCAAGA ACGTGATGAC CTCTTCCCGT
TCCAGGCCGC CGTTCGGCAT CGCCAACATG GGTAAGTCCT TCCGTAACGA GATCACCCCG
GGTAACTTCA TCTTCCGCAC CCGTGAGTTC GAGCAGATGG AGATGGAGTT CTTCGTCACG
CCCGGCACCG ATGAGGAATG GCACCAGTAC TGGATCGACG CCCGCACCCG CTGGTACATC
GACCTCGGCG TCAAGCCGGA GAACCTGCGC CACTACGAGC ATCCGAAGGA GAAGCTCTCC
CACTACTCCA AGCGCACCGT GGACATCGAA TACAAGTTCG GCTTCCAGGG TTCCGACTGG
GGCGAGCTCG AAGGCATCGC CAACCGTACC GATTACGATT TGAGCGCGCA CTCCAAGCAC
TCCGGCGAAG ACCTGAGCTA CTTCAACCAG GCCACCGGCG AGAAGTACGT GCCGTACGTC
ATCGAACCGG CCGCCGGCCT GACCCGCTCC CTGATGTGCT TCCTCGTGGA CGCCTACGAT
GTGGACGAGG CCCCGAACAC CAAGGGCGGC GTTGACAAGC GCACCGTGCT GCGTCTCGAC
CCGCGTCTGG CCCCGGTCAA GGCCGCCGTG CTGCCGCTGA GCAAGAAGCC TGAACTGCAG
ACCGTGGCCC AGAGCCTGGC CGACGACCTG CGCTTCAACG AGTGGATGAT CGACTACGAC
GAGTCCGGTG CCATCGGTCG TCGTTACCGT CGTCAGGACG AGATCGGCAC CCCGCTGTGC
ATCACCGTGG ACTTCGACAC CCTCGAGGAC CACGCTGTGA CCATCCGTGA GCGTGACACC
ATGGCCCAGG AGCGCGTCGC TCTTGACAAG GTGGCCGATT ACGTGGCCGC CCGCATCGGC
GAGAAGCGCA CCCGCGTGCC CCTGAAGCCT GTGGAAATGG GCGGTGAGCC TTGGCCTGAG
TCCGGCGTTC AGGAAGCCGG CGGCCTGTAC TAA
|
|---|
| Protein sequence | MAQSKLDEVV SLAKRRGFVF PAGEIYGGTR SAWDYGPLGV ALKDNIKREW WRSMVVTRPD
VVGVDTSIIL PPEVWVASGH VSVFNDPLVE CLNCHKRNRA DKLEESYAEK HGDKMPENGM
KDIVCPNCGT RGQWTEPRDF NMMLRTHLGP VEDENSLHYL RPETAQGIFV DFKNVMTSSR
SRPPFGIANM GKSFRNEITP GNFIFRTREF EQMEMEFFVT PGTDEEWHQY WIDARTRWYI
DLGVKPENLR HYEHPKEKLS HYSKRTVDIE YKFGFQGSDW GELEGIANRT DYDLSAHSKH
SGEDLSYFNQ ATGEKYVPYV IEPAAGLTRS LMCFLVDAYD VDEAPNTKGG VDKRTVLRLD
PRLAPVKAAV LPLSKKPELQ TVAQSLADDL RFNEWMIDYD ESGAIGRRYR RQDEIGTPLC
ITVDFDTLED HAVTIRERDT MAQERVALDK VADYVAARIG EKRTRVPLKP VEMGGEPWPE
SGVQEAGGLY
|
|---|
| |