| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0125 |
|---|
| Symbol | |
|---|
| ID | 6363492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 148449 |
|---|
| End bp | 149489 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642679265 |
|---|
| Product | LacI family response repressor |
|---|
| Protein accession | YP_001954069 |
|---|
| Protein GI | 189438988 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.258556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACGA TGAAGGAAAT CGCGAACAAG GCGGGGGTTT CCGTCTCTAC GGTATCGCTG
GTGCTCAACG GACGCGACGA GGGGCGCGTA AAGTCCAAAA TTGCGGACAA TGTGCGCGCC
ATCGCCACCA AGCTCGGCTA CCAGTCGAAT CCGCTGGCCA GTTCGCTGCG TACAGGCAGG
ACGCACATCC TCGGTTTCAT CAGCGAGGAG GTAGCCACCA CCCCGTACGC CGGCGGTATG
ATTCTGGGCG CGCAGACCGC CGCAAGCCAG TTCGGCTATA TGCTCATCAC CGTGAGCACC
GACGGCGAGA ACAGCGAGAG CGAGGAAATC GCCGCACTCA AGCGATACGG CACCGACGGC
TTTCTGTACG CCAAGATGTC GAATCGCATC ACCCATGTGC CTTCTTCGCT GGCCCAGACG
CCACTGGTGT TGGTGAATGC CACCGACTCG CTTGGCAAAG TCCCGAGCGT GGAACCGGAC
GAGTTCCAAA TCGGCTACGA CGCCACCACC AGATTGGTTA AGGCCGGATG CGCACGTATC
GCCTATGTGG GTTGCTTGGA GCCGATGATT GCGCAGGACG ATCGTTTGGA AGGCTATCAG
GCGGCGCTCA GGGACGCAGG CCTCGACTAT GACGATCATC TGGTCGTCAA TGTGCTCAAC
AACGGGCCGG CACTGACCGC AGTCAGCGAT TTGTTCGACG CCGAGCATCC GGACGGATTC
TTCTGCTTCA ACGATGCCCG CGCCTGGTAT GTGTACGAAT GCGCCGCACG CCGAGGACTC
ACGGTCGGCA AGGACATCTC CGTGGTCGGC GTGGACAACC ATCGCGTGTT CGCCGAAACG
CTGGAACCGA CGCTCACCAC TGTGGAACTG CCGCATTTCG AGATGGGCTA CTGGGCCGTG
GCCAAGCTGG TGTCGATTAT CGAAGGACGC TCGATGGACG ACGTCTCACG GCCAGCGACC
ACCGCTCCCC TGCCGCCGAT CGACGCGCCG ATTCCGGCGA AGATCCACTG CACGCTGATC
GAAAAGGCCT CGGTGAAGTA A
|
|---|
| Protein sequence | MVTMKEIANK AGVSVSTVSL VLNGRDEGRV KSKIADNVRA IATKLGYQSN PLASSLRTGR
THILGFISEE VATTPYAGGM ILGAQTAASQ FGYMLITVST DGENSESEEI AALKRYGTDG
FLYAKMSNRI THVPSSLAQT PLVLVNATDS LGKVPSVEPD EFQIGYDATT RLVKAGCARI
AYVGCLEPMI AQDDRLEGYQ AALRDAGLDY DDHLVVNVLN NGPALTAVSD LFDAEHPDGF
FCFNDARAWY VYECAARRGL TVGKDISVVG VDNHRVFAET LEPTLTTVEL PHFEMGYWAV
AKLVSIIEGR SMDDVSRPAT TAPLPPIDAP IPAKIHCTLI EKASVK
|
|---|
| |