| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0102 |
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| Symbol | hflC1 |
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| ID | 6364049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 120700 |
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| End bp | 121599 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642679241 |
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| Product | membrane protease-like protein |
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| Protein accession | YP_001954046 |
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| Protein GI | 189438965 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTAT TCTTTGCTGG TCCGCTGATT ATCATCGTGC TACTCATTGT TCTGCTGTCT
GCCGCACTCT TCGTCGTGCC GCAGCAGCAG GCGTACATCA TCGAACGCTT CGGCAAGTTC
CTTAAGGTCC AGTTCGCCGG CATCCACATC CGCATCCCGT TCGTGGACCG CATCGCCATG
AAAACCAACA TGCGTGTCAA CCAGCTTAAC GTGCAGCTGG AAACCAAGAC TCTTGACAAC
GTGTTCGTCA CCGTGGTGGC CTCCACCCAG TTCCGCGTGA ACCCGAACGA TGTGGCCACC
GCCTACTACG AGCTGCGTGA CCCGGCCGGT CAGCTGCGCT CCTACATGGA GGACGCGCTG
CGTTCCGCTA TCCCCGCACT GTCTTTGGAC GATGCCTTTG CTCGCAAGGA CGATGTGGCG
TTCGACGTGC AGAAGACCGT GGGCGCCGAA ATGAGCCGTT TCGGCTTCAC CGTAGTCAAG
ACGCTGATCA CCGCCATCGA CCCGAGCCCA CAGGTCAAGA ACGCGATGGA CTCCATCAAT
GCCGCCCAGC GTGAAAAGGA AGCCACCCGT CAGCGTGCCG AGGCCCAGCG TATCCAGATC
GAGACCCAAG CCGCCGCCGA TGCGGAGAAG ACTCGCTTGC AGGGTGAGGG CCAGGCCAAT
TACCGCCGCG AGATCGCCAA CGGTATCGTC GACCAGATCA AGAGTCTGCA GGCTGTGGGC
ATGAACATCA ACGACGTGAA CAACGTGGTG CTGTTCAACC AGTACCTCGA CGTGATGCGC
TCGCTGTCCG AATCGAACAA CACCAAGACC GTGGTGCTGC CCGCCTCCAC GCCCGGCGGT
TATCAGGATC TCTACGAGCA GGTCACCAAG GCCATGCTCA CCGCTTCCGA GACGAAGTAA
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| Protein sequence | MAVFFAGPLI IIVLLIVLLS AALFVVPQQQ AYIIERFGKF LKVQFAGIHI RIPFVDRIAM
KTNMRVNQLN VQLETKTLDN VFVTVVASTQ FRVNPNDVAT AYYELRDPAG QLRSYMEDAL
RSAIPALSLD DAFARKDDVA FDVQKTVGAE MSRFGFTVVK TLITAIDPSP QVKNAMDSIN
AAQREKEATR QRAEAQRIQI ETQAAADAEK TRLQGEGQAN YRREIANGIV DQIKSLQAVG
MNINDVNNVV LFNQYLDVMR SLSESNNTKT VVLPASTPGG YQDLYEQVTK AMLTASETK
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