Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0092 |
Symbol | hisM4 |
ID | 6363642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 114223 |
End bp | 114897 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642679231 |
Product | amino acid ABC transporter permease |
Protein accession | YP_001954036 |
Protein GI | 189438955 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCG CTGAAATACT GCTCCAGCCG GGCGTATTCC CACGTCTGTT GCAAGGCCTG TGGGTCACCG TGTGGATAGC CGGCGTATCC GTAGGCGCGT CCATCCCGGT CGGCCTGTTG GTGGGCTGGT TGATGACGCT GAAGAATCCC GTGATCCGGG CCGCGATGCG CATCTACCTC GACTTCATCC GCATTATGCC TCAGCTGGCG TTGCTGTTCC TTGCCTACTA CGGTTTTGCT CGATGGTTCG ATTGGAATCT CGATGCCACC GGTGCCTGCG TGCTGGTGTT CATCCTGTGG GGAGGCGCCG AGCTGGGCGA TCTGGTGCGT GGCGCATTGC AGTCGATTCC CAAAGTGCAG TACGAATCGA GCTACGTACT GGGGTTGAGC CCGTGGCAGA CCTTCTCCCG GGTGATTCTG CCGCAGGCTG TTCGCCGTAT GCTGCCGGCA TCCGTAAACT TGGCGACACG TATCGTCAAA ACGACATCAT TGGCCGTGCT GCTCGGTGTG GTCGAGGTCA TCAAGGTCGG CCAGCAGATT ATCGACGCGA ACCGATTCCA GTTCCCGACT GGAACCTTGT GGATTTATGG CGTGATTTTC TTTATGTACT TCATCGTGTG CTGGCCGCTG TCCATTGTGG CCCGCCGACT GGAAAAGAGG TGGTCGAATG ACTGA
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Protein sequence | MSGAEILLQP GVFPRLLQGL WVTVWIAGVS VGASIPVGLL VGWLMTLKNP VIRAAMRIYL DFIRIMPQLA LLFLAYYGFA RWFDWNLDAT GACVLVFILW GGAELGDLVR GALQSIPKVQ YESSYVLGLS PWQTFSRVIL PQAVRRMLPA SVNLATRIVK TTSLAVLLGV VEVIKVGQQI IDANRFQFPT GTLWIYGVIF FMYFIVCWPL SIVARRLEKR WSND
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