| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0085 |
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| Symbol | carB |
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| ID | 6363635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 104506 |
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| End bp | 107889 |
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| Gene Length | 3384 bp |
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| Protein Length | 1127 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642679224 |
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| Product | carbamoylphosphate synthase large subunit |
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| Protein accession | YP_001954029 |
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| Protein GI | 189438948 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAAGC GCACCGACAT CAAATCCGTG ATGGTCATCG GCTCCGGCCC GATCGTGATC
GGTCAGGCTG CGGAGTTCGA TTACTCGGGC ACCCAGGCAT GCCGCGTCCT TCGTGAGGAA
GGCATCCGCG TCATCCTCGT CAACTCCAAC CCGGCCACCA TCATGACCGA CCCGGAGATG
GCTGACGCCA CCTACATCGA GCCGATCGCC ACCCCGATCC TCGAGCAGAT CATCGCCAAG
GAACGCCCCG ACGCGCTCCT GCCCACCTTG GGCGGCCAGA CCGCGCTCAA CGCCGCCATG
GCGCTGGGCG AGGCCGGCGT CCTGAAGAAG TACAACGTCG AACTGATCGG TGCTTCCCTG
GAAGCCATCG ACCGTGGCGA GGACCGTGAA CTGTTCAAGA AGGTCGTTGA CGAGGCCGGC
GCCGAATCCG CCCGCTCCGA CATCGCCCAC AGCATCGAGG AAGTCGACAA GATCGCCGAG
AAGTTCGGCT ACCCGCTGGT CGTGCGCCCG AGCTTCACCA TGGGTGGCCT GGGCTCCGGC
ATCGCCCACA ACGAGGAGGA GCTGCACCGC ATCGCCGGCG CCGGCATCCA TTACTCGCCC
ACCGACGAAG TCCTGATCGA AGAGGGCATC GAGGGCTGGA AGGAATTCGA GCTCGAGCTC
ATGCGCGACC GCAACGACAA CGTCGTGGTC GTCTGCCCGA TCGAGAACGT CGACCCGGTC
GGCGTGCACA CCGGTGACTC CATCACCGTG GCCCCCTGCT TCACCCTGAC CGACCGCGAA
TACCAGAAGC TGCGTGACAT CGGCATCGCC ATCATCCGTG GCGTGGGCGT GGACACCGGC
GGCTGCAACA TCCAGTTCGC CGTTCATCCG GACACCGGTC GCATCATCGT CATCGAGATG
AACCCGCGCG TCTCCCGTTC CTCCGCACTG GCCTCCAAGG CCACCGGCTT CCCGATCGCC
AAGATCGCCA CCAAGCTGGC CCTCGGCTAC ACGCTCGACG AGATTCGCAA CGACATCACC
CAGTCCACGC CGGCCTCCTT CGAGCCGACC ATCGACTACG TGGTCACCAA GGTGCCGCGC
TTCGCTTTCG AGAAGTTCCC GGGCGCCGAC CCCACCCTGA CCACCTCCAT GAAGTCCGTG
GGCGAGGCCA TGGCCCTGGC CGGCAACTTC CAGGAGTCCC TCGGCAAGGC CATGCGCTCC
ATCGACAAGC GCCACATGGG CTTCAATTGG GATGGCGAGA AGCCGTCCGC CGAAGAAGTG
GCCGAACTGC TTGAGGCCAT CCACACCCCG ACCGAACACC GTTACCTGCA GCTCATGCGC
GCCATCTGGG GCGGTGCCAC GCTGGAGCAG GTGTTCGCGG CCACCAAGAT CGACCCGTGG
TTCCTGAAGC AGATCTTCCT CATCAATGAG ACCGCCATGA CGGTGCGCGA GGCCGAAACC
CTCACCCCGA GGCTGCTCAA GAAGGCCAAG CTCGCCGGTC TGTCCGACGT GCAGGTGGCC
CACCTGCGTG GTTTGGGCGA TGAAGGCGAG AACACCATCC GCGAACTGCG CTGGACCTAC
GGTCTGCGCC CGGTCTACAA GACCGTCGAC ACCTGCGCCG CCGAGTTCGA CGCCGCCACG
CCGTACTACT ACAGCTGCTA CGCCGACGAA ACCGAGCTGC GCCCGCGCGA ACGCGAGGCT
GTGATCATCC TCGGCTCCGG CCCGAACCGC ATCGGTCAGG GCATCGAGTT CGACTACACG
TGCGTGCACG CCGTGCAGGA GCTTGGCAAG GACTATGACA CCATCATGGT CAACTGCAAC
CCGGAGACCG TGTCCACCGA TTACGACATG TCCGACCGCC TCTACTTCGA GCCGCTCACC
TTCGAGGACG TGCTCGAGAT CTACGAGGCC GAGAAGAAGA TGGGCCCGGT CAAGGGCGTC
ATCGTCCAGC TCGGCGGCCA GACCCCGCTG TCCTTGGCCG CGCGTCTGAA GGCCGCCGGC
GTGCCGATTC TCGGCACCAC CCCGGAATCC ATCGACTTGG CCGAGAACCG TGAGCTGTTC
GGCGAAGTGC TCAAGAAGGC GGAGATGAAC GCCCCGCGTT ACGGCACCGC CCTGAGCCTC
GAAGAGGCCA AGGAAGCCGC CCACCGCATC GGTTACCCGG TGCTCGTGCG CCCGAGCTAC
GTGCTCGGCG GCCGTGGCAT GGAAATCGTC TACGATGACA AGCAGCTCAA CAAGTACGTG
GACCGCGCAC TTGCCGAGGC CAAGGCCGAT ACCGTGGTCT CCGGCCGCCT GCCTTCCCCG
CTGCTCATCG ACAAGTTCCT GCAAGACGCC ATCGAAATCG ATGTCGACGC ACTGTTCGAC
GGCGAGGAAC TATACATCGG CGGCATTATG GAGCACGTCG AGGAGGCCGG TGTCCACTCC
GGTGACGCCG CCTGCACCCT GCCTCCGTCC ACCCTGTCCG ACGACCAGAT TCGTCGCCTG
CGTGAAGGCA CCTACGCCAT CGCCAAGGGC TGCCATGTGC AGGGCCTGAT CAACGTGCAG
TACGCCTTCA TGGCCAACAC GCTGTACGTG ATCGAAGCCA ACCCGCGCGC CTCCCGTACC
GTGCCGTTCG CCTCCAAGGC CACCGGCGTG GCACTGGCCA AGGCTGCTGC CCGCATCATG
GCCGGCGAAA CCATCGCCGA TCAGCGTGCC AACGGTCTGC TGCTGCCTAA GGGCGACGGC
GGCGACATCC ACCCCGGCCA GCAGGTCGCG GTTAAGGAAT CCGTGCTGCC GTTCAAGCGC
TTCCGCACCC CGGTGGGCAA GACCGTCGAC ATCCTGCTCG GACCTGAGAT GCGTTCCACC
GGTGAGGTCA TGGGCTTCGA CCGTGACTTC CCGCACGCCT TCGCCAAGAG CCAGCTCGCC
GCCTACGACG GTGGCCTGCC GACCCACGGC AACGTGTTCA TCTCCGTGAA CGACACCGAC
AAGCGTCAGC TGCCGTTGAT CGCCGTTCGT CTCGAGGAGC TTGGATTCAA GCTCTGGGCC
ACCGAGGGCA CCGCCTCCGT GCTTCGCCGT TACGGCATCG AGTCGAACAT CGTGGACAAG
ATCAGCACCC GCGTGGACAC CGATCCGGAA GCCCCGGTCG AGGTGCATCA CGCTGCCGGA
TCCGTGGGCA AGAACGTGGT TCAGCTCATC GAGGAAGGCA AGATCGACAT GATCCTCAAC
ACGCCGAACT CGCGCGGCTC CCGTTCCGAC GGCTACTCCA TCCGTGCCGC CGCCATTGCC
GCCGATCTGC CGCAGTTCAC CACCATCACC GAGTTCCAGG CCGCACTGCT CGCTATCGAG
GCCGTGAAGC ATAATGATTA TCAGATCATG AGCATTCAGG AGCATTCGAA GCAGCTGTTC
GAATTGGAGC GACGGGAGTT CTGA
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| Protein sequence | MPKRTDIKSV MVIGSGPIVI GQAAEFDYSG TQACRVLREE GIRVILVNSN PATIMTDPEM
ADATYIEPIA TPILEQIIAK ERPDALLPTL GGQTALNAAM ALGEAGVLKK YNVELIGASL
EAIDRGEDRE LFKKVVDEAG AESARSDIAH SIEEVDKIAE KFGYPLVVRP SFTMGGLGSG
IAHNEEELHR IAGAGIHYSP TDEVLIEEGI EGWKEFELEL MRDRNDNVVV VCPIENVDPV
GVHTGDSITV APCFTLTDRE YQKLRDIGIA IIRGVGVDTG GCNIQFAVHP DTGRIIVIEM
NPRVSRSSAL ASKATGFPIA KIATKLALGY TLDEIRNDIT QSTPASFEPT IDYVVTKVPR
FAFEKFPGAD PTLTTSMKSV GEAMALAGNF QESLGKAMRS IDKRHMGFNW DGEKPSAEEV
AELLEAIHTP TEHRYLQLMR AIWGGATLEQ VFAATKIDPW FLKQIFLINE TAMTVREAET
LTPRLLKKAK LAGLSDVQVA HLRGLGDEGE NTIRELRWTY GLRPVYKTVD TCAAEFDAAT
PYYYSCYADE TELRPREREA VIILGSGPNR IGQGIEFDYT CVHAVQELGK DYDTIMVNCN
PETVSTDYDM SDRLYFEPLT FEDVLEIYEA EKKMGPVKGV IVQLGGQTPL SLAARLKAAG
VPILGTTPES IDLAENRELF GEVLKKAEMN APRYGTALSL EEAKEAAHRI GYPVLVRPSY
VLGGRGMEIV YDDKQLNKYV DRALAEAKAD TVVSGRLPSP LLIDKFLQDA IEIDVDALFD
GEELYIGGIM EHVEEAGVHS GDAACTLPPS TLSDDQIRRL REGTYAIAKG CHVQGLINVQ
YAFMANTLYV IEANPRASRT VPFASKATGV ALAKAAARIM AGETIADQRA NGLLLPKGDG
GDIHPGQQVA VKESVLPFKR FRTPVGKTVD ILLGPEMRST GEVMGFDRDF PHAFAKSQLA
AYDGGLPTHG NVFISVNDTD KRQLPLIAVR LEELGFKLWA TEGTASVLRR YGIESNIVDK
ISTRVDTDPE APVEVHHAAG SVGKNVVQLI EEGKIDMILN TPNSRGSRSD GYSIRAAAIA
ADLPQFTTIT EFQAALLAIE AVKHNDYQIM SIQEHSKQLF ELERREF
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