Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0080 |
Symbol | |
ID | 6364404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 100207 |
End bp | 101007 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642679219 |
Product | ABC transporter permease |
Protein accession | YP_001954024 |
Protein GI | 189438943 |
COG category | [R] General function prediction only |
COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCG ATCTGGGCAA TTCCTACAAC ATCGATATCT GGGGTCTGCT CATCGCGCTG GGCATGGTGG CCGTGGCGGC CATCATCAGC GAACTCATGC ATATGGGCAT CGGCAAGACC CTGATGTGGT CGTCGTGCCG CGCATTGGTG CAGCTGTGCG CCATGGGCTT CATCATCGGC TACGTGATCC GGTCGAACAG CGTGTGGATG GTGTTCGCCC TGATGGCGGT CATGCTGGTG GCGGCCGTGC AGATCGTGAT GTCCCGCGCA CGCGGCATCC CCAAGGGCCT TGCCGGGCCG ATCTTCCTGA GCCTGGTCAT CACCATGCTG CTGATGCTGG CGCTGGTCAC CGAGCTCATC GTGCGCCCGC ACCCGTGGTA CGCGCCCCAG CTGGTGGTGC CGCTGACCGG CATGCTGCTG GGCAACACCG TAACCGCCTT GGCGGTGGGA TTGAGCCGTT TCTACGAGAG CATGGAGGAG CGGCGTGACG AGGTGGATAT GATGCTGGCG CTGGGAGCGA CCCCGTGGGA GTCGGCCCGC CCGTCCATCG TCTCGTCGAT TCGCTTGGGC CTGCTGCCCA CCACCGCCTC GCTGGCGTCC AGCGGCATCG TGACGATCCC GGGCATGATG GCCGGTCAGG TGATCGCCGG CGGCGACCCG CTCAACGCCG CCAAGTACCA GTTCGTGGTC CTCGACGCCA TCGCCGCGCT GACCCTGCTG GCCGACGGCC TGATCATGGT CATGATCTAC CGCACCTGCT TCACCGCCGA CGACCAATAC CGCCCGCCCG AAGCGCGCTA A
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Protein sequence | MSGDLGNSYN IDIWGLLIAL GMVAVAAIIS ELMHMGIGKT LMWSSCRALV QLCAMGFIIG YVIRSNSVWM VFALMAVMLV AAVQIVMSRA RGIPKGLAGP IFLSLVITML LMLALVTELI VRPHPWYAPQ LVVPLTGMLL GNTVTALAVG LSRFYESMEE RRDEVDMMLA LGATPWESAR PSIVSSIRLG LLPTTASLAS SGIVTIPGMM AGQVIAGGDP LNAAKYQFVV LDAIAALTLL ADGLIMVMIY RTCFTADDQY RPPEAR
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