Gene BLD_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0058 
Symbol 
ID6363759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp70987 
End bp72258 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content66% 
IMG OID642679197 
ProductIS30 family transposase 
Protein accessionYP_001954002 
Protein GI189438921 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCAGAA GCCACCGAAA CGAAGACCGT GGCGGGGAAC ACCGTTGGAC GTTCAACGGC 
GTCGAATATC CGACGAGGAA GCTGATGTGC GAGGCGAGAC GCGCCGAGTA CGTGCGCCTG
CTGGACGAGG AAGGCATGAA CTTCACCCAG GCCGCGCACG CGGTCGGCGT CTCGAAACGC
ACCGGCAAGG CGTGGCGCAA CGGCAGGACG CGCGCCACGG GAAGGAACGA GAAACCCCTG
GTGGACTGGT ATCGTTCCAC CATGGACAAA CCCAAGACCC TCCATCCGCG ATACCTGAGC
CAGGAGGAGC GCATCCAGAT CGCGGACCGT CTGCGTCTGG GCGATTCGAT CCGCGCCATC
GCCCGCCTGC TGGGCCGCGA CCCCGGCACG GTCAGCCGCG AGGTCGAGCG CAACAGGAAT
CCCGAGTCCG GCGGTTACGA GCCTTACCGC GCCCAGCAGA AGGCCGCGGA CCGGCTCAAA
CGCCCCAAAC CGCGCAAGGC GGCCGAGGGC ACGCGACTGT GGGACGAGAT CGCCGCCGGG
TTGCGCAGGC ATTGGAGCCC GGAGCAGATA GCCAACCGGC TGAGGCTGGA CTTCCCGGAT
AATGGGGATA TGCACGCGAG CGTCGAGACG ATCTACCAGG CCATCTACCT GCAGGCCAGG
GGCGAACTCA AGCAGGAGCT GAAACGCGCC ATGAGGCAGG GGCGAACCGC CCGCAGACCC
CAAGGCGGCC AAGGCCGCAA ACCCCGTTTC CGCGAACCCA TGGCCATGAT CTCGGAGCGA
CCCCCGGAGA TCGAGGACCG GGCGGTCCCG GGCCATTGGG AGGGCGATCT CATCACCGGC
AGCCGCAACA AAAGCGCCAT CGGCACGCTC GTCGAGCGCA CCACCAGGTT CACGATCCTG
CTGCACCTGC CCGACGGGCA CGACGCCGAA CACGTCCAGC AGGCCATCAT CGACAAGATG
CAGCACCTGC CCAAACTCCT GCGCAACAGC CTGACCTGGG ACCAGGGAGC GGAACTCGCC
CTGCACAAAC GGATCGGCGC CTCGCTGGAC ATGGCCGTCT ACTTCTGCGA CCCGCACTCC
CCGTGGCAGC GCGGCACCAA CGAGAACACC AACGGGCTCC TGCGCCAGTA CTTCCCCAAA
GGCACCGACC TATCCGTCTA CCCGGAGGAC TACCTCGACG CGGTCGCCGA GGAACTCAAC
GACCGGCCAC GCAAAACCCT CGGGTTCATG AAACCAAGCG AGAAGATCAT CGAACTGCTC
GACGCCGCGT GA
 
Protein sequence
MTRSHRNEDR GGEHRWTFNG VEYPTRKLMC EARRAEYVRL LDEEGMNFTQ AAHAVGVSKR 
TGKAWRNGRT RATGRNEKPL VDWYRSTMDK PKTLHPRYLS QEERIQIADR LRLGDSIRAI
ARLLGRDPGT VSREVERNRN PESGGYEPYR AQQKAADRLK RPKPRKAAEG TRLWDEIAAG
LRRHWSPEQI ANRLRLDFPD NGDMHASVET IYQAIYLQAR GELKQELKRA MRQGRTARRP
QGGQGRKPRF REPMAMISER PPEIEDRAVP GHWEGDLITG SRNKSAIGTL VERTTRFTIL
LHLPDGHDAE HVQQAIIDKM QHLPKLLRNS LTWDQGAELA LHKRIGASLD MAVYFCDPHS
PWQRGTNENT NGLLRQYFPK GTDLSVYPED YLDAVAEELN DRPRKTLGFM KPSEKIIELL
DAA