Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0049 |
Symbol | araJ1 |
ID | 6363770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 61150 |
End bp | 62607 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642679188 |
Product | sugar efflux permease |
Protein accession | YP_001953993 |
Protein GI | 189438912 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.242248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAGC AGCATATTGA TAACGAGAAG ATTCCCACAC GTCTTATCGG CGCGATTGTG GCTGTCGGCT CACTTGCCTT CATTGGCATT CTGACCGAAA CCGTGATGAC CGTGCTTTTC CCCGCACTGA TGCGCGAATT CCATGTCGAC ACGGCCACTG TGCAATGGAT TACCACGATT TATCTGTTGG CGGTGGCCGC TACCATGCCC ATCAGCTCGT TTTTGAAGCG CCGATTCGCG CTGAAAACCA TTTTTCTTGC GGCTGTGATT CTGGCCATCG TTGGCTCGCT GATCATGATC GTCGCCCAAG CCTTCCCGCT GCTGATTGTC GCCCGCATTA TTCAGGGCAT TGGCTCAGGC GTGGCCACGC CGTTGATGAT CAACATCATC CTGGAGCAGT CTCCTCGTTC GAAAATCGGC CGATTGATGG GCGTAGGATC GCTGGTCATT ACCGTGGCTC CGGCCATCGG CCCGACCGTC GGCGGCGCGG TGACCACAGT GCTGCCGTGG CGCGCGATTT TCGTCATCGC CATTCCGCTG GTGCTAATCG CAGCATGCAT CGGCATGAAG TGCATTGAGC AGAAGACACC GACCGAGGCT GCCTATCTTG ACCCGATTCA GCTTGGGTCC ATTGTTGTCG CGTTGGTCGG TCTGGTGCTG GCGCTCAACC AAGGTGGCGT GGCCATCAGT GCGGCGGTGT CCGGCAAGTC AGCCACACGC TCCGGCATTA TCGCCATTGT CAGTCTGATT GCGGGCCTCG CCTTGTTGAT CGTGTTCGCC ATGAGTTCCA AGCGTGCCTT CTCCCCGCTG CTGCGCCTTG GCATTCTCAA GGATCCCGCC GTACTGTTAC ACGCCTGCGC ATATCTGCTG CTGCCATTGG TCGCCATCGG CTACGGCTAT GTCATCACCA ATGTGGCACA GCTCTCGCTC GGTACCACGG CATTTGTGGC CGGCTCTCTG GTACTGCCCG GAGCACTGGT CGGCGCTGTC TGTGCCCCGC TTGGCGGCTG GTTCTACGAT AAGTTCGGCG CGGTCAAGCC GATTCTGATT CCGATCGGCA TCGCTATTTT GGGCCCAGTG CTTATGCTGG TGTTCTCGAT GCAGCTTACG CCCTTGCTGC TCGCCGGATT CTATTTCATT TTCGGTCTGT TCTATTCCAT CGGCAATGCG AATGTGATGA CCAGTGGCCT GTCGGAGGTC TCTCCCGAGT TCAAGCCGGA CGGCAACGCC ATTTTCAACA CGTGTCTTCA GTTTGGCGGC GCTGCCGGTA CCGCACTGTT CTCCACGATT CTTTCCGTGG CTCAGGCCGG CGCAGGAGAA GAAGGCACCG CTGAGTTTGC TCACGCCACT GCCGTCGGCG GCACATGGAC GTTTGCCACG ATGACGGTTA TCTGCCTGAT TGGCTGGTGC TGTCTGGCCA CCGCGTTCCG CATTCGCGCG GCACGTAAGC GTGCATAA
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Protein sequence | MPEQHIDNEK IPTRLIGAIV AVGSLAFIGI LTETVMTVLF PALMREFHVD TATVQWITTI YLLAVAATMP ISSFLKRRFA LKTIFLAAVI LAIVGSLIMI VAQAFPLLIV ARIIQGIGSG VATPLMINII LEQSPRSKIG RLMGVGSLVI TVAPAIGPTV GGAVTTVLPW RAIFVIAIPL VLIAACIGMK CIEQKTPTEA AYLDPIQLGS IVVALVGLVL ALNQGGVAIS AAVSGKSATR SGIIAIVSLI AGLALLIVFA MSSKRAFSPL LRLGILKDPA VLLHACAYLL LPLVAIGYGY VITNVAQLSL GTTAFVAGSL VLPGALVGAV CAPLGGWFYD KFGAVKPILI PIGIAILGPV LMLVFSMQLT PLLLAGFYFI FGLFYSIGNA NVMTSGLSEV SPEFKPDGNA IFNTCLQFGG AAGTALFSTI LSVAQAGAGE EGTAEFAHAT AVGGTWTFAT MTVICLIGWC CLATAFRIRA ARKRA
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