Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0041 |
Symbol | |
ID | 6364458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 50274 |
End bp | 51653 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642679180 |
Product | recombination factor protein RarA |
Protein accession | YP_001953985 |
Protein GI | 189438904 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.481618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGA ACGATTTGTT TGGGGCGGCT GATGCGCCGG AGTCGATGAC GCGGCCGTTG GCGGTGCGCA TGCGTCCACG CACTTTGGAC GAGGTGATTG GCCAAACGCA GGTGTTGGGC CAGGGCTCGC CGCTGCGCCG CCTCGCCAAT CCGGCCAGCA AAGGCAGTCT CACCGCGCCG AGCTCCGTAA TCCTGTTCGG CCCTCCAGGC GTCGGCAAAA CCACGCTCGC CACCATCGTG GCCGGCCAAT CCGGCCGCGT GTTTGAGGAA CTCTCCGCCG TGACATCCGG CGTCAAAGAC GTGCGCGACG TACTCACCCG CGCTCACGAA CGGCTCGTGT CACGCGGCCA GGAAACCGTA CTGTTCATCG ACGAGGTACA TCGCTTCTCC AAATCCCAGC AGGATGCGCT GCTTCCCGCC GTCGAAAACC GCGACGTGAC CTTTATCGGC GCCACCACCG AGAACCCGAG CTTTTCCATC ATCAAACCGT TGCTCTCCCG TTCGGTGGTC GTCAAGCTTG AGTCATTGGA GCCTGATCAG CTCATCGAAC TGGTGCAGCG CGCGCTGACT GATGACCGCG GTCTCAGGGG CGAGGTCAAA GCCACGGACG AAGCCATCGC CGACATCGTG CGCATGGCCG GTGGTGACGC ACGCAAGAGT CTCACGATTC TGGAGGCCGC GGCTGGCGCG GTCACTGGCG ACGAAGCCCG CAAAAAGGGC GCACGCCGAC CCATCATCAC CCCCGAAATC GTGGCTACGG TAATGGACAC CGCCACCGTG CGCTACGACA AAGACGGCGA TGACCATTAC GACGTGATTT CCGCATTCAT CAAATCCATG CGGGGCTCCG ATCCGGATGC CGCCATCCAT TATCTGGCAC GCATGCTGAA AGCGGGTGAA GATCCGCGCT TCATCGCCCG TCGCATCATG ATCGCCGCCA GCGAGGAAGT CGGCATGGCC GCCCCGCAGA TTTTGCAGGT CACCGTGGCT GCGGCGCAGG CCGTGGCGCT GGTCGGCATG CCCGAGGCAC GTATTATTTT GGCCGAAGCT ACGATTGCCG TGGCCACCGC GCCCAAATCA AACGCCAGCT ATAACGCCAT TAACCAGGCG CTCGCGGACG TGGATGCCGG CAAGATCGGC GCTGTTCCGC TGTATTTGAG GAACGCCCCC ACCAAGCTTA TGAAAGAGTG GGGCAACCAC GAGGGCTACA AGTATGCGCA CGATTGGCCC GGTGCCGTGG CGCCACAGGA ATATATGCCC GAAGAGCTGC GTGGCACCGA GTACTACCAT CCCAACGATC GCGGCTATGA ACACGAAGTC AGCCAGCGTC TTGCCAAGAT TCGCCCGATA CTGCATGGTG GGGAACCCGA ACAGAAATGA
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Protein sequence | MSENDLFGAA DAPESMTRPL AVRMRPRTLD EVIGQTQVLG QGSPLRRLAN PASKGSLTAP SSVILFGPPG VGKTTLATIV AGQSGRVFEE LSAVTSGVKD VRDVLTRAHE RLVSRGQETV LFIDEVHRFS KSQQDALLPA VENRDVTFIG ATTENPSFSI IKPLLSRSVV VKLESLEPDQ LIELVQRALT DDRGLRGEVK ATDEAIADIV RMAGGDARKS LTILEAAAGA VTGDEARKKG ARRPIITPEI VATVMDTATV RYDKDGDDHY DVISAFIKSM RGSDPDAAIH YLARMLKAGE DPRFIARRIM IAASEEVGMA APQILQVTVA AAQAVALVGM PEARIILAEA TIAVATAPKS NASYNAINQA LADVDAGKIG AVPLYLRNAP TKLMKEWGNH EGYKYAHDWP GAVAPQEYMP EELRGTEYYH PNDRGYEHEV SQRLAKIRPI LHGGEPEQK
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