| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0039 |
|---|
| Symbol | |
|---|
| ID | 6364456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 46417 |
|---|
| End bp | 47490 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642679178 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001953983 |
|---|
| Protein GI | 189438902 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.290555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGG ACGACGACAG AACCAACGAG CCTGAAGAGG CCGGCAAGTG GGGTACGGCC
GGAAAATCCT CAGGAAAGAA CAACAAGAAC GGCAAGGGAA AGGAATCCAA AACCGATCGA
CGGATCGACA AGGTATTACA GCTCGCGGTG GATCGCATAG ACACCATCGA CTCCAGTGCC
AGCGTGCCTG AACGACTGGC GCGTGCGGCG AAATCCAGTG AACTGCTCAG CGCCGTATGG
TCGTTGCCGC CCGCTCAACG TCTTATGTTC CACCACGGCA TGCAGGTCAC TGATGTCGAA
GGCGATTCCA CTCCCGGATT CGACGGCAAT AAAGAGGACG CCGAGAAGTT CATTTCGATC
AGCTCCTCCG AAATCGCCCG ATACCAGCGG CTCATGTACG CGAATGGCGT CAAAGGCTCG
ACACGGCGGC TGCTCATCGT GCTGCAAGGC ATGGATGCCT CCGGCAAGGG CGGCATTGTG
CGTCACGTGT TCAGCCAAGG CGACCCGATG GGCATCCATT ACCATGGCTT CGGCAAGCCT
ACGGCCGAGG AGCTCGACCA CGACTTCCTC TGGCGTGTGA AGCGTGAATT GCCCAAGCCG
GGGTGGATTG CCGTATTCGA CCGCTCCCAT TATGAAGATG TGGTCATGCC GCACGTCTAT
GGCACCTATC CCGAAGACGT ATGGCGTGCC CGCTACGACC AGATCAACGA TTTCGAACGT
GAACTGGCCG CCAGCGGATG CGCCATCCTC AAGATCTTCC TCGTGGTAAG CCAGGAAGAA
CAGAAAAAAC ACTTTCTTGG GAGGCTGGAT GATCCCACCA AGTTCTGGAA ATTCGATATC
TCCGACCTCG AGGCCCGCGA CCGATGGGAT GAGTACATGT TCGCTTGGCA GGAAGTGTTC
GAGAAAACCA GCACGGCCGC CGCACCGTGG TACCTCGTTC CGGCCGATAA CCGCTGGTAT
TCGCGAGCCG TGGTCTCCGA ACTGCTGCGC ACCACCTTGA AGAACATGAA CATGACCTGG
CCTCCCCTCG AACCCGAGGT GGACCCCGAC GAGGTGCGCC GCCGGTTGGC GTGA
|
|---|
| Protein sequence | MAKDDDRTNE PEEAGKWGTA GKSSGKNNKN GKGKESKTDR RIDKVLQLAV DRIDTIDSSA
SVPERLARAA KSSELLSAVW SLPPAQRLMF HHGMQVTDVE GDSTPGFDGN KEDAEKFISI
SSSEIARYQR LMYANGVKGS TRRLLIVLQG MDASGKGGIV RHVFSQGDPM GIHYHGFGKP
TAEELDHDFL WRVKRELPKP GWIAVFDRSH YEDVVMPHVY GTYPEDVWRA RYDQINDFER
ELAASGCAIL KIFLVVSQEE QKKHFLGRLD DPTKFWKFDI SDLEARDRWD EYMFAWQEVF
EKTSTAAAPW YLVPADNRWY SRAVVSELLR TTLKNMNMTW PPLEPEVDPD EVRRRLA
|
|---|
| |