| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0030 |
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| Symbol | |
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| ID | 6363606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 35111 |
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| End bp | 36166 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642679169 |
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| Product | Integrase |
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| Protein accession | YP_001953974 |
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| Protein GI | 189438893 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0264646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGG CAAGGAAAAC GGCCGCCAGC TCCGGTGAAC CGGACTTCTG GCGAGTCGCG
CGCGACTGGC TGCACCACTG GCTGCCCAAG GTGCGGGGCA GCTCGCCGAA GACCGTCGAG
GCGTACCGCA TCGGCCTGGA ATCCTACGTC CGATGGCTCG AAACCACGGA AGGCACGCAG
CGCAGCCACA TCGGTTTCGG GCATTTCGAC CGGGCGCGCC TGGGCCGGTG GGTCGAATGG
ATGCGGACCG AGCGCGGGTA CTCGGACCGC ACCATCATGC TGAGGATGAC GACGATGCGC
GTGTTCCTCG ACCACGCGGG CCTCGAACAC CCGGCATTGA CCGCGCTGGG CAACGACGCG
GCCGGCATAC GTGTCAAACC ACCCGCGCGC AAACCCGTCG ACCACCTCGG GGAGGAGCAC
ACCAAAGCGT TGCTGACCGC ATGGGGCACC GGCGACGCCA AATCGCGCAG GAACCGCATG
CTCCTGATCC TCATGTACGA CACCGCCGCC AGGATCGGCG AACTCGCCGC ACTGACCATC
GCGGACGTGG GTATGGATAA GCCGGCCAGG GTCACGCTCA CCGGCAAACG CGGCAAGAGC
CGGGTCGTGC CCCTGGGAGA AAGGACACGA ACCCACCTGG CCGCCTACCT CGAGGAATTC
CATCCCGGAC CGTCCATGCG CGACGGCGAC AGGCCGTTGT TCCACTCGAC GAGGAACGGC
GCCATCCAGC CGCTCTCCGT GGACCGGATC GACGAGATCC TCAAAACCGC GGCGGCCAGA
GCACGCCGCG GGACGTGCCC GTCCATGCCC GAACGCGTCC ACTGCCACCT GATCCGCCGG
ACCCGCGCCA TGGACCTCTA CCAACAGGGC GTGCCGCTAC CGCTCATCAT GCAACTGCTC
GGCCACGAAA GCATGAGCAC AACCAGCGCG TTCTACGCGT TCGCGACCCT CGACATGATG
CGCAAAGCCG TCGATGCGGC CAACCCCGGC CCCGACCCCT CCAAGGAGAC ATGGCTCAGC
GAGCAACGAC TCCGACAACT ACACACCCTC AAATAA
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| Protein sequence | MSKARKTAAS SGEPDFWRVA RDWLHHWLPK VRGSSPKTVE AYRIGLESYV RWLETTEGTQ
RSHIGFGHFD RARLGRWVEW MRTERGYSDR TIMLRMTTMR VFLDHAGLEH PALTALGNDA
AGIRVKPPAR KPVDHLGEEH TKALLTAWGT GDAKSRRNRM LLILMYDTAA RIGELAALTI
ADVGMDKPAR VTLTGKRGKS RVVPLGERTR THLAAYLEEF HPGPSMRDGD RPLFHSTRNG
AIQPLSVDRI DEILKTAAAR ARRGTCPSMP ERVHCHLIRR TRAMDLYQQG VPLPLIMQLL
GHESMSTTSA FYAFATLDMM RKAVDAANPG PDPSKETWLS EQRLRQLHTL K
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