Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0029 |
Symbol | |
ID | 6363605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 34248 |
End bp | 35024 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642679168 |
Product | transposase |
Protein accession | YP_001953973 |
Protein GI | 189438892 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.204737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACACAA ACACCCGGAA CCAGAATGCC GCCCAGGGCG GGAAATCGGC GTCCGTCCGT CCTCGGGGCG GGGCGGATGC CGGGGGCGGC GATGACGTGG AGGCGTTGCG CCGTAGGGTC GAGGAGCTGG AGTTGGAGAA CGCGTTGATG CGGGAGGTGG TGGAGGTCGT AAAAAAAGAC CCAGGCGCCG ACCTGCGGCG CCTGTCGAAC AGGGAGAAGA CGATGCTGAT CGACCGGCTG AGGCCGAGGT ATTCGCTGAG GTCGATGGCC TGCTTGCTGC GCATAGCGCC GAGCAGCTAC CACTACCACC ATGCCAGGAT CGGCGTTGAC AAGTACGCCG GGCTGCGCGC CCGCGTGGCG CGGGCGTTCG CCGACTCCAA GGGCAGGTAC GGGTACCGTC GCGTCAAGGC CGCGCTCGGG ACGGGCGTCT CGGAGAAGGT GATCCGCAGG CTCATGGCCG AGGGCGGGCT CTCGGCGCAT GTTCCCAAAC GGCGGCGTTA CAGCTCCTAC GAGGGGGAGA CCACGCCCGC TCCCGGTAAT CTCGTCAACC GGGACTTCAC CGCCGAACGG CCCAATGAGA AGTGGCTCAC GGACATCACC GAGATCAAGG CCAGCGACGG GAAGGTGTAC CTCTCGCCGA TGATCGACTG CCATGACGGC AAGATCGTCG CCTACACGGC CGGCTTCCAT CCCAACGCGG AGCTCGCCAA CCGGATGCTC GCCGAGGCGG CGGAGACGCT GCCCGACAAC GCCCGTCCCG TGGTCCATTC CGATTAA
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Protein sequence | MNTNTRNQNA AQGGKSASVR PRGGADAGGG DDVEALRRRV EELELENALM REVVEVVKKD PGADLRRLSN REKTMLIDRL RPRYSLRSMA CLLRIAPSSY HYHHARIGVD KYAGLRARVA RAFADSKGRY GYRRVKAALG TGVSEKVIRR LMAEGGLSAH VPKRRRYSSY EGETTPAPGN LVNRDFTAER PNEKWLTDIT EIKASDGKVY LSPMIDCHDG KIVAYTAGFH PNAELANRML AEAAETLPDN ARPVVHSD
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