| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0010 |
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| Symbol | clpA1 |
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| ID | 6363697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 9047 |
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| End bp | 11656 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642679149 |
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| Product | ATP-binding subunit of Clp protease |
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| Protein accession | YP_001953954 |
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| Protein GI | 189438873 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAAC GGTTTACCGA CCGTGCACGG CGCGTGATCG TGTTGGCGCA GGAAGAGGCG
AGGGCCCTTC AGCACAACTA CATCGGCACC GAACACCTGC TGCTCGGCCT GATCCGCGAA
GGTGAGGGTG TAGCCGCCAA GGCACTCGCC TCGAAGGGCG TGGAGCTGGA TGCCACCCGC
AAGCAGGTTG AAGAAATGAT CGGCAAGGGC AACGCGGCTC CGAACGGGCA CATCCCCTTT
ACTCCGCACG CCAAGCAGGT GTTGGAGTTT TCGCTGCGTG AAGCCCTGCA GCTGGGCCAC
AGCTACATCG GCACCGAGCA CATCCTGCTC GGCCTGATTC GCGAAGGCGA AGGCGTGGGC
ACCCAGGTGC TCATCAAGAT GGACGTCGAT CTGGGCGAGT TGCGTAGCGC GACCATCGAT
ATGATTCGCG GCAACTCCGG CACCGGCACC GGTGACGGCA AGGGCGACTT GGCCAACGCC
GGCGGCGTGA CGGACAAGCA GAACAAGTCC GGTTCCGCCA TCCTCGATCA GTTCGGCCGC
AACCTGACCG CCGAAGCCGC TGAAGGCAAG CTGGACCCGG TCATCGGCCG TACCAACGAG
ATTGAGCGCG TTATGGTCGT GCTTTCCCGC CGCACCAAGA ACAACCCGGT GCTGATCGGC
GAGCCCGGCG TGGGCAAGAC CGCTGTGGTC GAAGGCTTGG CCCAGAAGAT CCAAGCCGGC
GACGTGCCGG AAACCCTGAA GGGCAAGCAG GTCTACTCGC TGGACCTCGG TTCCATGGTG
GCCGGCTCCC GCTACCGTGG TGATTTCGAG GAGCGCCTGA AGAAGGTGCT GAAGGAAATC
AAGACTCGTG GCGACATCGT GCTGTTCATC GACGAGATTC ACACCATCGT GGGCGCCGGC
TCGGCTGACG GCGCGCTGGG TGCCTCCGAC ATGTTGAAGC CGATGCTGGC CCGTGGCGAG
CTCCAGACCA TTGGTGCCAC CACCACCGAC GAGTACCGCA AGTACATCGA GAAGGACGCG
GCTCTGGAAC GCCGTTTCCA GCCGATTCAG GTGCACGAGC CGACCATCGC CGAGACCATC
GAGATCCTGA AGGGCCTGCG TTCCCGTTAC GAGAACCACC ACCACGTGAC CATCACCGAT
GGCGCGCTGC AGTCTGCCGC AGAGCTGTCC AGCCGGTACA TCCAGGACCG TAACCTGCCT
GACAAGGCCA TCGACCTGAT CGATGAGGCC GGTGCACGCC TGCGCATCAA GCGCCTGACC
GCCCCGCCTG AGCTCAAGGA ACTCGACGAG AAGATCGCCA AGATCGCCGC CGACAAGGAC
GAGGCCATCA AGGGCCAGGA CTTCGAGAAG GCCGCCGAAC TGCGCGACAA GCAGGAGAAG
CTGGAAGCCG ATCGCAAGCA GAAGGAAGAC TCCTGGCGCG AAGGCGAGTC CGACGTCAAG
ATGGTCGTGG ACGAGGACGT GATCGCCGAG GTCATCAGCT CCACCACCGG TATCCCGGTG
TTCAAGCTGA CTCAGGCCGA GTCCAAGAAA CTGCTCAACA TGGAAGCCGA ACTGCACAAG
CGCATCATCG GCCAGGACGA GGCGGTTTCC GCCCTGTCCC GCTCTATCCG CCGTACTCGC
GTGGGTCTGA AGGACCCGAA GCGCCCGTCC GGTTCGTTCA TCTTCGCCGG CCCCACCGGC
GTCGGCAAGA CCGAGCTGGC CAAGACGCTC GCCGAATTCC TGTTCGACGA TGAGGACGCG
CTGATTCGCG TGGATATGTC CGAGTTCTCC GAGAAGTACG CGGCTTCGCG ACTCTTCGGT
GCGCCTCCGG GATACGTCGG CTACGAGGAA GGCGGCGAGC TCACCGAAAA GGTGCGCCGC
AAGCCGTTCT CCGTGGTGCT GTTCGACGAG ATCGAAAAGG CTCATCCGGA CATCTTCAAC
ACGTTGCTGC AGGTGCTCGA TGACGGCCAC CTGACCGACG GTCAGGGCCG CAAGGTGGAC
TTTAAGAACA CCATCATCAT CCTGACCACC AACCTCGGTA CGCGAGACAT CGCCAAGGCC
GCCAACACGG GCTTCAACCT AGGTGCCAAC AACGAGTCCA GCTACCAGCG CATGAAGGAC
CAGGTCAGCT CCGAATTGAA GCAGCAGTTC CGCCCGGAGT TCCTGAACCG TCTGGACGAC
ATCATCGTCT TCAAGCAGCT CACCGAGCCG CAGGTGCGCC AGATCGTGGA TCTGGACGTC
AAGCAGCTCA ACGACCGCCT GTTCGACCGT CATATGTCGC TCGAACTCAC CGACGCCGCC
AAGGACCTGC TCGCGCAGAA GGGCTTCGAC CCGCTGCTCG GTGCCCGTCC GCTGCGCCGC
GTGATTCAGC GCGACATCGA GGACGCCATC TCCGAGAAGA TCCTGATGGG CGATCTCGAA
GACGGTCAGC GCGTGATTGT GGATGCGGAA GGCGAGGGTA TCCTCGGCGA ATTCACCTTC
AAGGGTGAGG AGTTCGAGGA GCCGGCCGCC GCCGATAAGC CCGCCGAAGA CGGTGCCGCC
ACTGATGGCG AGACTCCAGC CGACGCCACT CCGGCCACTG AGCCGGCCGA ATCCGCTCCC
GCCGATTCCG GTGACGCTCC GCAGGAGTAG
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| Protein sequence | MFERFTDRAR RVIVLAQEEA RALQHNYIGT EHLLLGLIRE GEGVAAKALA SKGVELDATR
KQVEEMIGKG NAAPNGHIPF TPHAKQVLEF SLREALQLGH SYIGTEHILL GLIREGEGVG
TQVLIKMDVD LGELRSATID MIRGNSGTGT GDGKGDLANA GGVTDKQNKS GSAILDQFGR
NLTAEAAEGK LDPVIGRTNE IERVMVVLSR RTKNNPVLIG EPGVGKTAVV EGLAQKIQAG
DVPETLKGKQ VYSLDLGSMV AGSRYRGDFE ERLKKVLKEI KTRGDIVLFI DEIHTIVGAG
SADGALGASD MLKPMLARGE LQTIGATTTD EYRKYIEKDA ALERRFQPIQ VHEPTIAETI
EILKGLRSRY ENHHHVTITD GALQSAAELS SRYIQDRNLP DKAIDLIDEA GARLRIKRLT
APPELKELDE KIAKIAADKD EAIKGQDFEK AAELRDKQEK LEADRKQKED SWREGESDVK
MVVDEDVIAE VISSTTGIPV FKLTQAESKK LLNMEAELHK RIIGQDEAVS ALSRSIRRTR
VGLKDPKRPS GSFIFAGPTG VGKTELAKTL AEFLFDDEDA LIRVDMSEFS EKYAASRLFG
APPGYVGYEE GGELTEKVRR KPFSVVLFDE IEKAHPDIFN TLLQVLDDGH LTDGQGRKVD
FKNTIIILTT NLGTRDIAKA ANTGFNLGAN NESSYQRMKD QVSSELKQQF RPEFLNRLDD
IIVFKQLTEP QVRQIVDLDV KQLNDRLFDR HMSLELTDAA KDLLAQKGFD PLLGARPLRR
VIQRDIEDAI SEKILMGDLE DGQRVIVDAE GEGILGEFTF KGEEFEEPAA ADKPAEDGAA
TDGETPADAT PATEPAESAP ADSGDAPQE
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